RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 NclP09405 707 aaKnown RBP10.33□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Slc24a1Q91WD8 1130 aa10.32□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Atad2bE9Q166 1460 aaKnown RBP10.32□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Il27Q8K3I6 234 aa10.3□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Eid3Q3V124 375 aa10.29□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Pds5bQ4VA53 1446 aaKnown RBP10.29□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Plcd4Q8K3R3 807 aa10.28□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Eif5bQ05D44 1216 aaKnown RBP10.28□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Plekhg3Q4VAC9 1341 aa10.28□□□□□ -0.76
Bdnf-204ENSMUST00000111044 Rapgef2Q8CHG7 1496 aa10.27□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Clip1Q922J3 1391 aa10.26□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Cep162Q6ZQ06 1403 aa10.25□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Top2aQ01320 1528 aaKnown RBP10.24□□□□□ -0.77
Bdnf-204ENSMUST00000111044 DaxxO35613 739 aa10.24□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Washc2Q6PGL7 1334 aa10.24□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Ncapd3Q6ZQK0 1506 aa10.24□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Ipo9Q91YE6 1041 aa10.23□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Rpap1Q80TE0 1409 aa10.22□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Ipo4Q8VI75 1082 aa10.22□□□□□ -0.77
Bdnf-204ENSMUST00000111044 Kdm5bQ80Y84 1544 aa10.18□□□□□ -0.78
Bdnf-204ENSMUST00000111044 Kif15Q6P9L6 1387 aa10.17□□□□□ -0.78
Bdnf-204ENSMUST00000111044 Frmpd1A2AKB4 1549 aa10.17□□□□□ -0.78
Bdnf-204ENSMUST00000111044 Gm13697A2AK42 830 aa10.17□□□□□ -0.78
Bdnf-204ENSMUST00000111044 Pak3Q61036 559 aa10.17□□□□□ -0.78
Bdnf-204ENSMUST00000111044 NeflP08551 543 aa10.14□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Eif4g1Q6NZJ6 1600 aaKnown RBP10.13□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Ercc6F8VPZ5 1481 aa10.13□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Wdr62Q3U3T8 1523 aa10.12□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Smg6P61406 1418 aaKnown RBP10.11□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Tcerg1Q8CGF7 1100 aaKnown RBP10.11□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Baz1bQ9Z277 1479 aa10.09□□□□□ -0.79
Bdnf-204ENSMUST00000111044 PtprkP35822 1457 aa10.09□□□□□ -0.79
Bdnf-204ENSMUST00000111044 Liat1Q810M6 228 aa10.08□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Ccer2J3QPU5 274 aa10.07□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Mrs2Q5NCE8 434 aa10.07□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Ubl4bQ9CQ84 188 aa10.06□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Fam50aQ9WV03 339 aaKnown RBP10.06□□□□□ -0.8
Bdnf-204ENSMUST00000111044 TnnQ80Z71 1560 aa10.06□□□□□ -0.8
Bdnf-204ENSMUST00000111044 UacaQ8CGB3 1411 aa10.06□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Arhgap35Q91YM2 1499 aa10.05□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Pdcl3Q8BVF2 240 aa10.05□□□□□ -0.8
Bdnf-204ENSMUST00000111044 TchhA0A0B4J1F9 1599 aa10.04□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Npm1Q61937 292 aaKnown RBP10.04□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Egfem1Q8C088 590 aa10.04□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Eea1Q8BL66 1411 aa10.04□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Iqcf3Q9D498 203 aa10.04□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Lamc3Q9R0B6 1581 aa10.03□□□□□ -0.8
Bdnf-204ENSMUST00000111044 P3h3Q8CG70 732 aa10.03□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Slc4a3P16283 1227 aa10.03□□□□□ -0.8
Bdnf-204ENSMUST00000111044 Setd5Q5XJV7 1441 aa10.02□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Ccdc18Q640L5 1455 aa10.02□□□□□ -0.81
Bdnf-204ENSMUST00000111044 AU015836B2RUM3 263 aa10□□□□□ -0.81
Bdnf-204ENSMUST00000111044 NrkQ9R0G8 1455 aa9.99□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Phldb1Q6PDH0 1371 aaKnown RBP9.99□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Shroom4Q1W617 1475 aa9.99□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Ube2uB1AUC4 352 aa9.98□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Gtf2a1Q99PM3 378 aa9.98□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Camsap1A2AHC3 1581 aa9.98□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Cux2P70298 1426 aa9.98□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Anp32bQ9EST5 272 aaKnown RBP9.98□□□□□ -0.81
Bdnf-204ENSMUST00000111044 CanxP35564 591 aaKnown RBP9.97□□□□□ -0.81
Bdnf-204ENSMUST00000111044 Ankrd36D3Z4K0 1415 aa9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Arap1Q4LDD4 1452 aa9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Sin3aQ60520 1274 aaKnown RBP9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Grin2bQ01097 1482 aa9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Hspa5P20029 655 aaKnown RBP9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Lmod2Q3UHZ5 550 aa9.95□□□□□ -0.82
Bdnf-204ENSMUST00000111044 ChgaP26339 463 aaKnown RBP9.94□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Rrp9Q91WM3 475 aaKnown RBP9.94□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Ofd1Q80Z25 1017 aa9.94□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Gm13695A2AK44 830 aa9.93□□□□□ -0.82
Bdnf-204ENSMUST00000111044 BlmO88700 1416 aa9.92□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Unc13aQ4KUS2 1712 aa9.92□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Dnttip2Q8R2M2 758 aaKnown RBP9.92□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Rtn4Q99P72 1162 aaKnown RBP9.92□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Fyco1Q8VDC1 1437 aa9.91□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Mia2Q91ZV0 1396 aa9.9□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Camsap2Q8C1B1 1461 aa9.9□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Arhgef5E9Q7D5 1581 aa9.9□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Mroh2bQ7M6Y6 1581 aa9.9□□□□□ -0.82
Bdnf-204ENSMUST00000111044 Map3k1P53349 1493 aa9.89□□□□□ -0.83
Bdnf-204ENSMUST00000111044 LrpprcQ6PB66 1392 aaKnown RBP9.89□□□□□ -0.83
Bdnf-204ENSMUST00000111044 AampJ3QN89 436 aa9.89□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Taok2Q6ZQ29 1240 aa9.89□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Mre11Q61216 706 aa9.88□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Ncoa2Q61026 1462 aa9.88□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Ppm1gQ61074 542 aa9.87□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Wwc2Q6NXJ0 1187 aa9.87□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Exoc6Q8R313 802 aa9.87□□□□□ -0.83
Bdnf-204ENSMUST00000111044 DmtnQ9WV69 405 aa9.87□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Dnai1Q8C0M8 701 aa9.87□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Slc4a2P13808 1237 aaKnown RBP9.86□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Efcab5A0JP43 1406 aa9.85□□□□□ -0.83
Bdnf-204ENSMUST00000111044 CntlnA2AM05 1397 aa9.85□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Sart3Q9JLI8 962 aaKnown RBP9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Arhgap27A2AB59 869 aa9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Kcnn1Q9EQR3 537 aa9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Tiam1Q60610 1591 aa9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Naip1Q9QWK5 1403 aa9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 4933402E13RikQ9D4D2 429 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms