RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 CrebzfQ91ZR3 358 aa9.22□□□□□ -0.93
Hmgb1-203ENSMUST00000110505 Dmrta2A2A9A2 531 aa9.19□□□□□ -0.94
Hmgb1-203ENSMUST00000110505 PygbQ8CI94 843 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-203ENSMUST00000110505 Dcbld2Q91ZV3 769 aa9.18□□□□□ -0.94
Hmgb1-203ENSMUST00000110505 Hdac5Q9Z2V6 1113 aa9.14□□□□□ -0.95
Hmgb1-203ENSMUST00000110505 Krtap4-1Q3UUY3 169 aa9.13□□□□□ -0.95
Hmgb1-203ENSMUST00000110505 Gm45233A0A0N4SVE0 221 aa9.12□□□□□ -0.95
Hmgb1-203ENSMUST00000110505 MycnP03966 462 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-203ENSMUST00000110505 ZxdbA2CE44 873 aa9.09□□□□□ -0.95
Hmgb1-203ENSMUST00000110505 Gm13697A2AK42 830 aa9.08□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 Zbtb7bQ64321 544 aa9.08□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 Kdm5dQ62240 1548 aa9.07□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 Atad2Q8CDM1 1040 aa9.05□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 NacadQ5SWP3 1504 aa9.05□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 Pdap1Q3UHX2 181 aaKnown RBP9.05□□□□□ -0.96
Hmgb1-203ENSMUST00000110505 Pde4dQ01063 747 aa9.02□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 Arhgef1Q61210 920 aaKnown RBP9.01□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 Tulp1Q9Z273 543 aa9□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 Pak3Q61036 559 aa8.97□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 Znf516Q7TSH3 1157 aa8.97□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 Fam181bQ80VF6 417 aa8.97□□□□□ -0.97
Hmgb1-203ENSMUST00000110505 C1qbpO35658 278 aa8.94□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Repin1Q5U4E2 545 aa8.93□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Znf579Q80VM4 562 aa8.91□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Fam117bQ3U3E2 584 aa8.91□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Kank4Q6P9J5 1016 aa8.91□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 St18Q80TY4 1045 aa8.91□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Ndufv2Q9D6J6 248 aa8.91□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Sycp2Q9CUU3 1500 aa8.9□□□□□ -0.98
Hmgb1-203ENSMUST00000110505 Pcdh10E9PXQ7 1057 aa8.88□□□□□ -0.99
Hmgb1-203ENSMUST00000110505 Bclaf1Q8K019 919 aaKnown RBP8.88□□□□□ -0.99
Hmgb1-203ENSMUST00000110505 BicraF8VPZ9 1578 aa8.86□□□□□ -0.99
Hmgb1-203ENSMUST00000110505 Pelp1Q9DBD5 1123 aaKnown RBP8.85□□□□□ -0.99
Hmgb1-203ENSMUST00000110505 Hmx1O70218 332 aa8.83□□□□□ -1
Hmgb1-203ENSMUST00000110505 Prim1P20664 417 aa8.82□□□□□ -1
Hmgb1-203ENSMUST00000110505 Jph4Q80WT0 628 aa8.82□□□□□ -1
Hmgb1-203ENSMUST00000110505 Scarf1Q5ND28 820 aa8.81□□□□□ -1
Hmgb1-203ENSMUST00000110505 EdaraddQ8VHX2 208 aa8.81□□□□□ -1
Hmgb1-203ENSMUST00000110505 Fndc3aQ8BX90 1198 aa8.8□□□□□ -1
Hmgb1-203ENSMUST00000110505 Chrm1P12657 460 aa8.77□□□□□ -1
Hmgb1-203ENSMUST00000110505 Msh5Q9QUM7 833 aa8.76□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 Axin1O35625 863 aa8.74□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 Dcaf1Q80TR8 1506 aa8.73□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 Dkk1O54908 272 aa8.71□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 PsdQ5DTT2 1024 aa8.71□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 Spock2Q9ER58 423 aa8.71□□□□□ -1.01
Hmgb1-203ENSMUST00000110505 Prdm10Q3UTQ7 1184 aa8.7□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Ier5lQ99J55 406 aa8.7□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Lce6aD3YV94 81 aa8.68□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Pcdhb17Q91VD8 799 aa8.68□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Thoc2B1AZI6 1594 aaKnown RBP8.67□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Scnn1bQ9WU38 638 aa8.67□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Evi5P97366 809 aa8.66□□□□□ -1.02
Hmgb1-203ENSMUST00000110505 Sall2Q9QX96 1004 aa8.64□□□□□ -1.03
Hmgb1-203ENSMUST00000110505 Ecm2Q5FW85 670 aa8.63□□□□□ -1.03
Hmgb1-203ENSMUST00000110505 Irx5Q9JKQ4 484 aa8.63□□□□□ -1.03
Hmgb1-203ENSMUST00000110505 Pds5bQ4VA53 1446 aaKnown RBP8.6□□□□□ -1.03
Hmgb1-203ENSMUST00000110505 Adnp2Q8CHC8 1165 aaKnown RBP8.6□□□□□ -1.03
Hmgb1-203ENSMUST00000110505 Thap8E9Q695 213 aa8.58□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 ElnP54320 860 aa8.58□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Actn4P57780 912 aaKnown RBP8.58□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Nap1l5Q9JJF0 156 aa8.57□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Rb1cc1Q9ESK9 1588 aa8.57□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Ferd3lQ923Z4 168 aa8.55□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Cc2d2aQ8CFW7 1633 aa8.54□□□□□ -1.04
Hmgb1-203ENSMUST00000110505 Fkbp4P30416 458 aa8.52□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Kdm2aP59997 1161 aa8.51□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Gm11563B1AQ90 168 aa8.51□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Krtap4-7Q9D732 168 aa8.51□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Gga1Q8R0H9 635 aa8.49□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Atad2bE9Q166 1460 aaKnown RBP8.48□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Gm11555B1AQ89 175 aa8.46□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Ankrd65F6YK91 380 aa8.46□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Dnm1lQ8K1M6 742 aa8.46□□□□□ -1.05
Hmgb1-203ENSMUST00000110505 Apba1B2RUJ5 842 aa8.46□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 RragcQ99K70 398 aa8.46□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Neurod1Q60867 357 aa8.45□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Ercc6F8VPZ5 1481 aa8.45□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Rnf166Q3U9F6 237 aa8.44□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 E9Q0B3 247 aa8.43□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Setdb2Q8C267 713 aa8.43□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Ano8Q6PB70 1060 aa8.43□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 TimelessQ9R1X4 1197 aa8.43□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Smpd1Q04519 627 aa8.42□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Dnajc5P60904 198 aa8.41□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Myt1lP97500 1187 aa8.41□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Fam135aQ6NS59 1506 aa8.4□□□□□ -1.06
Hmgb1-203ENSMUST00000110505 Zcchc6Q5BLK4 1491 aaKnown RBP8.4□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Baz1aO88379 1555 aa8.39□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Ppp6r1Q7TSI3 856 aa8.38□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Sptlc1O35704 473 aa8.37□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Smarca2Q6DIC0 1577 aa8.37□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Arid3aQ62431 601 aa8.37□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Otop3Q80UF9 577 aa8.37□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Stk3Q9JI10 497 aa8.37□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Tox2A2A472 547 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Hoxa2P31245 372 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Taok2Q6ZQ29 1240 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Onecut3Q8K557 490 aa8.34□□□□□ -1.07
Hmgb1-203ENSMUST00000110505 Prdm16A2A935 1275 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms