RNA–Protein interactions for RNA: ENSMUST00000107473.2

Rara-202, Transcript of Retinoic acid receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Rara, Length 3,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-202ENSMUST00000107473 NrkQ9R0G8 1455 aa23.93■■□□□ 1.42
Rara-202ENSMUST00000107473 Hnrnpul2Q00PI9 745 aaKnown RBP23.92■■□□□ 1.42
Rara-202ENSMUST00000107473 Arhgef5E9Q7D5 1581 aa23.92■■□□□ 1.42
Rara-202ENSMUST00000107473 Ercc6F8VPZ5 1481 aa23.91■■□□□ 1.42
Rara-202ENSMUST00000107473 Ccdc18Q640L5 1455 aa23.86■■□□□ 1.41
Rara-202ENSMUST00000107473 Naip1Q9QWK5 1403 aa23.86■■□□□ 1.41
Rara-202ENSMUST00000107473 Camsap1A2AHC3 1581 aa23.85■■□□□ 1.41
Rara-202ENSMUST00000107473 Cux2P70298 1426 aa23.83■■□□□ 1.4
Rara-202ENSMUST00000107473 Lamc3Q9R0B6 1581 aa23.82■■□□□ 1.4
Rara-202ENSMUST00000107473 Grin2bQ01097 1482 aa23.79■■□□□ 1.4
Rara-202ENSMUST00000107473 Sin3aQ60520 1274 aaKnown RBP23.78■■□□□ 1.4
Rara-202ENSMUST00000107473 Mroh2bQ7M6Y6 1581 aa23.75■■□□□ 1.39
Rara-202ENSMUST00000107473 Slx4Q6P1D7 1565 aa23.73■■□□□ 1.39
Rara-202ENSMUST00000107473 Tiam1Q60610 1591 aa23.73■■□□□ 1.39
Rara-202ENSMUST00000107473 CenpbP27790 599 aa23.71■■□□□ 1.39
Rara-202ENSMUST00000107473 Aplp2Q06335 707 aa23.7■■□□□ 1.38
Rara-202ENSMUST00000107473 Kdm5bQ80Y84 1544 aa23.69■■□□□ 1.38
Rara-202ENSMUST00000107473 Pcf11G3X9Z4 1553 aa23.69■■□□□ 1.38
Rara-202ENSMUST00000107473 Aebp1Q640N1 1128 aa23.68■■□□□ 1.38
Rara-202ENSMUST00000107473 Ankrd26Q811D2 1581 aa23.68■■□□□ 1.38
Rara-202ENSMUST00000107473 Unc13aQ4KUS2 1712 aa23.68■■□□□ 1.38
Rara-202ENSMUST00000107473 Cux1P53564 1515 aa23.67■■□□□ 1.38
Rara-202ENSMUST00000107473 3425401B19RikD3Z1D3 1412 aa23.64■■□□□ 1.37
Rara-202ENSMUST00000107473 Map3k1P53349 1493 aa23.61■■□□□ 1.37
Rara-202ENSMUST00000107473 Rad54l2Q99NG0 1466 aa23.6■■□□□ 1.37
Rara-202ENSMUST00000107473 LrpprcQ6PB66 1392 aaKnown RBP23.58■■□□□ 1.37
Rara-202ENSMUST00000107473 Rpap1Q80TE0 1409 aa23.55■■□□□ 1.36
Rara-202ENSMUST00000107473 Phldb1Q6PDH0 1371 aaKnown RBP23.55■■□□□ 1.36
Rara-202ENSMUST00000107473 Carmil1Q6EDY6 1374 aa23.54■■□□□ 1.36
Rara-202ENSMUST00000107473 Duox2A2AQ99 1517 aa23.52■■□□□ 1.36
Rara-202ENSMUST00000107473 Eif5bQ05D44 1216 aaKnown RBP23.51■■□□□ 1.35
Rara-202ENSMUST00000107473 CntlnA2AM05 1397 aa23.5■■□□□ 1.35
Rara-202ENSMUST00000107473 Fam71e1A1L3C1 212 aa23.44■■□□□ 1.34
Rara-202ENSMUST00000107473 Dhx29Q6PGC1 1365 aaKnown RBP23.43■■□□□ 1.34
Rara-202ENSMUST00000107473 Fyco1Q8VDC1 1437 aa23.43■■□□□ 1.34
Rara-202ENSMUST00000107473 Zfp644E9QA22 1323 aa23.42■■□□□ 1.34
Rara-202ENSMUST00000107473 Zbtb7cQ8VCZ7 619 aa23.41■■□□□ 1.34
Rara-202ENSMUST00000107473 Ccnb3Q810T2 1396 aa23.41■■□□□ 1.34
Rara-202ENSMUST00000107473 PogzQ8BZH4 1409 aaKnown RBP23.4■■□□□ 1.34
Rara-202ENSMUST00000107473 Efcab5A0JP43 1406 aa23.4■■□□□ 1.34
Rara-202ENSMUST00000107473 Znf710Q3U288 666 aa23.37■■□□□ 1.33
Rara-202ENSMUST00000107473 Erich3F6QRE9 1637 aa23.36■■□□□ 1.33
Rara-202ENSMUST00000107473 TchhA0A0B4J1F9 1599 aa23.36■■□□□ 1.33
Rara-202ENSMUST00000107473 Gm7298A0A0N4SVU1 1476 aa23.36■■□□□ 1.33
Rara-202ENSMUST00000107473 P3h3Q8CG70 732 aa23.34■■□□□ 1.33
Rara-202ENSMUST00000107473 Tnnt3Q9QZ47 272 aa23.34■■□□□ 1.33
Rara-202ENSMUST00000107473 Cabp1Q9JLK7 227 aa23.33■■□□□ 1.33
Rara-202ENSMUST00000107473 Zbtb4Q5F293 982 aa23.33■■□□□ 1.32
Rara-202ENSMUST00000107473 Samd9lQ69Z37 1561 aa23.32■■□□□ 1.32
Rara-202ENSMUST00000107473 Fkbp15Q6P9Q6 1216 aaKnown RBP23.32■■□□□ 1.32
Rara-202ENSMUST00000107473 Urb2E9Q7L1 1524 aaKnown RBP23.32■■□□□ 1.32
Rara-202ENSMUST00000107473 Gm13697A2AK42 830 aa23.31■■□□□ 1.32
Rara-202ENSMUST00000107473 Lmo7E9PYF4 1699 aaKnown RBP23.31■■□□□ 1.32
Rara-202ENSMUST00000107473 Gm1043A0A140LJC2 1431 aa23.31■■□□□ 1.32
Rara-202ENSMUST00000107473 Mia2Q91ZV0 1396 aa23.3■■□□□ 1.32
Rara-202ENSMUST00000107473 A2mQ6GQT1 1474 aa23.3■■□□□ 1.32
Rara-202ENSMUST00000107473 Fhad1A6PWD2 1420 aa23.27■■□□□ 1.32
Rara-202ENSMUST00000107473 Kif27Q7M6Z4 1394 aa23.26■■□□□ 1.31
Rara-202ENSMUST00000107473 Mphosph9A6H5Y1 991 aa23.26■■□□□ 1.31
Rara-202ENSMUST00000107473 Dnajc5bQ9CQ94 199 aa23.26■■□□□ 1.31
Rara-202ENSMUST00000107473 Naip2Q9QUK4 1447 aa23.26■■□□□ 1.31
Rara-202ENSMUST00000107473 Ccer2J3QPU5 274 aa23.25■■□□□ 1.31
Rara-202ENSMUST00000107473 Wwc2Q6NXJ0 1187 aa23.24■■□□□ 1.31
Rara-202ENSMUST00000107473 Mrs2Q5NCE8 434 aa23.21■■□□□ 1.31
Rara-202ENSMUST00000107473 Stra8P70278 393 aa23.21■■□□□ 1.31
Rara-202ENSMUST00000107473 SynmQ70IV5 1561 aa23.2■■□□□ 1.31
Rara-202ENSMUST00000107473 Vps8Q0P5W1 1427 aa23.19■■□□□ 1.3
Rara-202ENSMUST00000107473 Arhgap27A2AB59 869 aa23.19■■□□□ 1.3
Rara-202ENSMUST00000107473 Calr4Q3TQS0 420 aa23.19■■□□□ 1.3
Rara-202ENSMUST00000107473 Pkd2O35245 966 aa23.16■■□□□ 1.3
Rara-202ENSMUST00000107473 Rgl3Q3UYI5 709 aa23.16■■□□□ 1.3
Rara-202ENSMUST00000107473 EprsQ8CGC7 1512 aaKnown RBP23.14■■□□□ 1.29
Rara-202ENSMUST00000107473 UacaQ8CGB3 1411 aa23.13■■□□□ 1.29
Rara-202ENSMUST00000107473 CadpsQ80TJ1 1355 aa23.12■■□□□ 1.29
Rara-202ENSMUST00000107473 Nolc1E9Q5C9 702 aaKnown RBP23.1■■□□□ 1.29
Rara-202ENSMUST00000107473 Ankrd36D3Z4K0 1415 aa23.1■■□□□ 1.29
Rara-202ENSMUST00000107473 Gpatch8A2A6A1 1505 aa23.09■■□□□ 1.29
Rara-202ENSMUST00000107473 Smg6P61406 1418 aaKnown RBP23.08■■□□□ 1.28
Rara-202ENSMUST00000107473 Dennd4bQ3U1Y4 1499 aa23.07■■□□□ 1.28
Rara-202ENSMUST00000107473 Grwd1Q810D6 446 aaKnown RBP23.06■■□□□ 1.28
Rara-202ENSMUST00000107473 Thoc2B1AZI6 1594 aaKnown RBP23.06■■□□□ 1.28
Rara-202ENSMUST00000107473 Naip5Q9R016 1403 aa23.05■■□□□ 1.28
Rara-202ENSMUST00000107473 Usp47Q8BY87 1376 aa23.04■■□□□ 1.28
Rara-202ENSMUST00000107473 WrnO09053 1401 aa23.04■■□□□ 1.28
Rara-202ENSMUST00000107473 NexmifQ5DTT1 1515 aa23.04■■□□□ 1.28
Rara-202ENSMUST00000107473 Exoc6Q8R313 802 aa23.04■■□□□ 1.28
Rara-202ENSMUST00000107473 Pla2r1Q62028 1487 aa23.03■■□□□ 1.28
Rara-202ENSMUST00000107473 BC005561E9Q5E2 1589 aa23.03■■□□□ 1.28
Rara-202ENSMUST00000107473 NrdcQ8BHG1 1161 aa23.01■■□□□ 1.27
Rara-202ENSMUST00000107473 Plb1Q3TTY0 1478 aa23.01■■□□□ 1.27
Rara-202ENSMUST00000107473 Ppp4r2Q0VGB7 417 aa23.01■■□□□ 1.27
Rara-202ENSMUST00000107473 Ncoa2Q61026 1462 aa23■■□□□ 1.27
Rara-202ENSMUST00000107473 Crocc2F6XLV1 1638 aa22.98■■□□□ 1.27
Rara-202ENSMUST00000107473 Anp32aO35381 247 aa22.97■■□□□ 1.27
Rara-202ENSMUST00000107473 Slc4a2P13808 1237 aaKnown RBP22.95■■□□□ 1.27
Rara-202ENSMUST00000107473 Trak1Q6PD31 939 aa22.95■■□□□ 1.27
Rara-202ENSMUST00000107473 PxdnQ3UQ28 1475 aa22.95■■□□□ 1.26
Rara-202ENSMUST00000107473 Kif21aQ9QXL2 1672 aa22.95■■□□□ 1.26
Rara-202ENSMUST00000107473 Slc4a3P16283 1227 aa22.94■■□□□ 1.26
Rara-202ENSMUST00000107473 Polr1aO35134 1717 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms