RNA–Protein interactions for RNA: ENSMUST00000060516.13

Cd44-202, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 3,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-202ENSMUST00000060516 Dhx29Q6PGC1 1365 aaKnown RBP7.42□□□□□ -1.22
Cd44-202ENSMUST00000060516 1700123L14RikQ3V2K7 440 aa7.42□□□□□ -1.22
Cd44-202ENSMUST00000060516 Sall2Q9QX96 1004 aa7.42□□□□□ -1.22
Cd44-202ENSMUST00000060516 Pprc1Q6NZN1 1644 aa7.42□□□□□ -1.22
Cd44-202ENSMUST00000060516 Ttbk1Q6PCN3 1308 aa7.42□□□□□ -1.22
Cd44-202ENSMUST00000060516 Synj1Q8CHC4 1574 aa7.41□□□□□ -1.22
Cd44-202ENSMUST00000060516 Fgd6Q69ZL1 1399 aa7.41□□□□□ -1.22
Cd44-202ENSMUST00000060516 Nup160Q9Z0W3 1402 aaKnown RBP7.41□□□□□ -1.22
Cd44-202ENSMUST00000060516 Alpk3Q924C5 1678 aa7.4□□□□□ -1.23
Cd44-202ENSMUST00000060516 Pelp1Q9DBD5 1123 aaKnown RBP7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 Ccdc88bQ4QRL3 1481 aa7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 Neo1P97798 1493 aa7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 Mier1Q5UAK0 511 aa7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 TnnQ80Z71 1560 aa7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 LrpprcQ6PB66 1392 aaKnown RBP7.39□□□□□ -1.23
Cd44-202ENSMUST00000060516 Fbxo41Q6NS60 873 aa7.38□□□□□ -1.23
Cd44-202ENSMUST00000060516 AqrQ8CFQ3 1481 aaKnown RBP7.37□□□□□ -1.23
Cd44-202ENSMUST00000060516 Gm156Q58A37 223 aa7.37□□□□□ -1.23
Cd44-202ENSMUST00000060516 Cngb1E1AZ71 1325 aa7.37□□□□□ -1.23
Cd44-202ENSMUST00000060516 Clasp1Q80TV8 1535 aaKnown RBP7.37□□□□□ -1.23
Cd44-202ENSMUST00000060516 CadpsQ80TJ1 1355 aa7.36□□□□□ -1.23
Cd44-202ENSMUST00000060516 Zeb1Q64318 1117 aa7.36□□□□□ -1.23
Cd44-202ENSMUST00000060516 PogzQ8BZH4 1409 aaKnown RBP7.35□□□□□ -1.23
Cd44-202ENSMUST00000060516 Rapgef2Q8CHG7 1496 aa7.34□□□□□ -1.23
Cd44-202ENSMUST00000060516 Csrnp3P59055 597 aa7.34□□□□□ -1.23
Cd44-202ENSMUST00000060516 AI481877A2ALV5 1481 aa7.31□□□□□ -1.24
Cd44-202ENSMUST00000060516 Disp1Q3TDN0 1521 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 Camsap1A2AHC3 1581 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 Ttc37F8VPK0 1563 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 Abcc1O35379 1528 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 Aplp2Q06335 707 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 AcrbpQ3V140 540 aa7.3□□□□□ -1.24
Cd44-202ENSMUST00000060516 Prdm10Q3UTQ7 1184 aa7.29□□□□□ -1.24
Cd44-202ENSMUST00000060516 Myt1Q8CFC2 1127 aa7.29□□□□□ -1.24
Cd44-202ENSMUST00000060516 Mapkbp1Q6NS57 1503 aa7.29□□□□□ -1.24
Cd44-202ENSMUST00000060516 Arhgef12Q8R4H2 1543 aaKnown RBP7.28□□□□□ -1.24
Cd44-202ENSMUST00000060516 Aebp2Q9Z248 504 aaKnown RBP7.27□□□□□ -1.25
Cd44-202ENSMUST00000060516 Ercc6l2Q9JIM3 1537 aa7.27□□□□□ -1.25
Cd44-202ENSMUST00000060516 Iqsec2Q5DU25 1478 aa7.26□□□□□ -1.25
Cd44-202ENSMUST00000060516 Pde4cQ3UEI1 686 aa7.25□□□□□ -1.25
Cd44-202ENSMUST00000060516 Chd1P40201 1711 aa7.25□□□□□ -1.25
Cd44-202ENSMUST00000060516 Brwd3A2AHJ4 1799 aa7.24□□□□□ -1.25
Cd44-202ENSMUST00000060516 Ythdc2B2RR83 1445 aaKnown RBP7.23□□□□□ -1.25
Cd44-202ENSMUST00000060516 Ak9G3UYQ4 1894 aa7.23□□□□□ -1.25
Cd44-202ENSMUST00000060516 Hecw2Q6I6G8 1578 aa7.23□□□□□ -1.25
Cd44-202ENSMUST00000060516 Efcab5A0JP43 1406 aa7.23□□□□□ -1.25
Cd44-202ENSMUST00000060516 ClspnQ80YR7 1315 aa7.22□□□□□ -1.25
Cd44-202ENSMUST00000060516 CenpbP27790 599 aa7.22□□□□□ -1.25
Cd44-202ENSMUST00000060516 Duox2A2AQ99 1517 aa7.22□□□□□ -1.25
Cd44-202ENSMUST00000060516 Top2aQ01320 1528 aaKnown RBP7.22□□□□□ -1.25
Cd44-202ENSMUST00000060516 NrkQ9R0G8 1455 aa7.21□□□□□ -1.25
Cd44-202ENSMUST00000060516 Nlrp6Q91WS2 869 aa7.21□□□□□ -1.26
Cd44-202ENSMUST00000060516 Map3k4O08648 1597 aa7.2□□□□□ -1.26
Cd44-202ENSMUST00000060516 Zfyve16Q80U44 1528 aa7.2□□□□□ -1.26
Cd44-202ENSMUST00000060516 Rtn4Q99P72 1162 aaKnown RBP7.2□□□□□ -1.26
Cd44-202ENSMUST00000060516 Cdk11bP24788 784 aaKnown RBP7.2□□□□□ -1.26
Cd44-202ENSMUST00000060516 Nop58Q6DFW4 536 aaKnown RBP7.18□□□□□ -1.26
Cd44-202ENSMUST00000060516 Dnmt1P13864 1620 aaKnown RBP7.18□□□□□ -1.26
Cd44-202ENSMUST00000060516 AglF8VPN4 1532 aa7.17□□□□□ -1.26
Cd44-202ENSMUST00000060516 Igf1rQ60751 1373 aa7.17□□□□□ -1.26
Cd44-202ENSMUST00000060516 Samd9lQ69Z37 1561 aa7.17□□□□□ -1.26
Cd44-202ENSMUST00000060516 Setd1bQ8CFT2 1985 aa7.17□□□□□ -1.26
Cd44-202ENSMUST00000060516 Ecm2Q5FW85 670 aa7.16□□□□□ -1.26
Cd44-202ENSMUST00000060516 Arid3aQ62431 601 aa7.16□□□□□ -1.26
Cd44-202ENSMUST00000060516 Grin2aP35436 1464 aa7.16□□□□□ -1.26
Cd44-202ENSMUST00000060516 Cyb5rlB1AS42 316 aa7.15□□□□□ -1.26
Cd44-202ENSMUST00000060516 Eif4g1Q6NZJ6 1600 aaKnown RBP7.15□□□□□ -1.26
Cd44-202ENSMUST00000060516 Gm14025A2AP89 1413 aa7.15□□□□□ -1.26
Cd44-202ENSMUST00000060516 Tshz2Q68FE9 1030 aa7.15□□□□□ -1.27
Cd44-202ENSMUST00000060516 Soga1E1U8D0 1418 aa7.15□□□□□ -1.27
Cd44-202ENSMUST00000060516 Kdm6bQ5NCY0 1641 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 GapdhsQ64467 440 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 Grin2bQ01097 1482 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 Npm2Q80W85 207 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 Ppp1r18Q8BQ30 594 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 Ncapd3Q6ZQK0 1506 aa7.14□□□□□ -1.27
Cd44-202ENSMUST00000060516 Esf1Q3V1V3 845 aaKnown RBP7.13□□□□□ -1.27
Cd44-202ENSMUST00000060516 Taok2Q6ZQ29 1240 aa7.13□□□□□ -1.27
Cd44-202ENSMUST00000060516 Trap1aP19473 224 aa7.13□□□□□ -1.27
Cd44-202ENSMUST00000060516 Magi3Q9EQJ9 1476 aa7.12□□□□□ -1.27
Cd44-202ENSMUST00000060516 Kdm5bQ80Y84 1544 aa7.12□□□□□ -1.27
Cd44-202ENSMUST00000060516 Rnf17Q99MV7 1640 aa7.12□□□□□ -1.27
Cd44-202ENSMUST00000060516 Naip2Q9QUK4 1447 aa7.11□□□□□ -1.27
Cd44-202ENSMUST00000060516 Cep162Q6ZQ06 1403 aa7.11□□□□□ -1.27
Cd44-202ENSMUST00000060516 Prdm16A2A935 1275 aa7.1□□□□□ -1.27
Cd44-202ENSMUST00000060516 Wdr66E9Q743 1299 aa7.1□□□□□ -1.27
Cd44-202ENSMUST00000060516 Fmn1Q05860 1466 aa7.1□□□□□ -1.27
Cd44-202ENSMUST00000060516 Rrbp1Q99PL5 1605 aaKnown RBP7.1□□□□□ -1.27
Cd44-202ENSMUST00000060516 TchhA0A0B4J1F9 1599 aa7.09□□□□□ -1.27
Cd44-202ENSMUST00000060516 UbtfP25976 765 aaKnown RBP7.08□□□□□ -1.28
Cd44-202ENSMUST00000060516 BC005561E9Q5E2 1589 aa7.08□□□□□ -1.28
Cd44-202ENSMUST00000060516 TonslQ6NZL6 1363 aa7.08□□□□□ -1.28
Cd44-202ENSMUST00000060516 AknaQ80VW7 1404 aa7.08□□□□□ -1.28
Cd44-202ENSMUST00000060516 Kiaa1210E9Q0C6 1637 aa7.07□□□□□ -1.28
Cd44-202ENSMUST00000060516 Adamts12Q811B3 1600 aa7.06□□□□□ -1.28
Cd44-202ENSMUST00000060516 Fndc1E9Q043 1732 aa7.06□□□□□ -1.28
Cd44-202ENSMUST00000060516 Cdca7Q9D0M2 382 aa7.06□□□□□ -1.28
Cd44-202ENSMUST00000060516 Wdr7Q920I9 1489 aa7.05□□□□□ -1.28
Cd44-202ENSMUST00000060516 Gm38655A0A286YDK6 273 aa7.05□□□□□ -1.28
Cd44-202ENSMUST00000060516 Atf5O70191 283 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 203.7 ms