RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Ncoa2Q61026 1462 aa13.18□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Egfem1Q8C088 590 aa13.17□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Cul7Q8VE73 1689 aa13.17□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Dennd4bQ3U1Y4 1499 aa13.17□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Lmo7E9PYF4 1699 aaKnown RBP13.17□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 3425401B19RikD3Z1D3 1412 aa13.16□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Pprc1Q6NZN1 1644 aa13.16□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Baz1bQ9Z277 1479 aa13.16□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Liat1Q810M6 228 aa13.16□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Washc2Q6PGL7 1334 aa13.14□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Disp1Q3TDN0 1521 aa13.14□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Ankrd26Q811D2 1581 aa13.13□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Ubl4bQ9CQ84 188 aa13.13□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Tnnt3Q9QZ47 272 aa13.13□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Supt16hQ920B9 1047 aa13.13□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Ccdc18Q640L5 1455 aa13.11□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Naip1Q9QWK5 1403 aa13.09□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Camsap2Q8C1B1 1461 aa13.09□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Pcf11G3X9Z4 1553 aa13.09□□□□□ -0.31
Ccdc171-201ENSMUST00000053414 Pak3Q61036 559 aa13.08□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Pelp1Q9DBD5 1123 aaKnown RBP13.08□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Anp32aO35381 247 aa13.08□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Unc13aQ4KUS2 1712 aa13.07□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Iqgap2Q3UQ44 1575 aa13.06□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Dhx29Q6PGC1 1365 aaKnown RBP13.05□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Thoc2B1AZI6 1594 aaKnown RBP13.05□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Crocc2F6XLV1 1638 aa13.05□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Camsap1A2AHC3 1581 aa13.04□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Ttbk1Q6PCN3 1308 aa13.03□□□□□ -0.32
Ccdc171-201ENSMUST00000053414 Map3k1P53349 1493 aa13.02□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Myt1lP97500 1187 aa13.01□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Eea1Q8BL66 1411 aa13.01□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Naip5Q9R016 1403 aa13.01□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Hdac5Q9Z2V6 1113 aa13□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Smg6P61406 1418 aaKnown RBP13□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Fhod3Q76LL6 1578 aa12.99□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Calr4Q3TQS0 420 aa12.99□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Setbp1Q9Z180 1582 aa12.98□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Peg3Q3URU2 1571 aa12.97□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Shroom4Q1W617 1475 aa12.96□□□□□ -0.33
Ccdc171-201ENSMUST00000053414 Ankrd36D3Z4K0 1415 aa12.96□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Amer1Q7TS75 1132 aa12.95□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Lamc3Q9R0B6 1581 aa12.95□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Sin3aQ60520 1274 aaKnown RBP12.93□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Gm13697A2AK42 830 aa12.92□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Hspa5P20029 655 aaKnown RBP12.92□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Ube2uB1AUC4 352 aa12.92□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Mroh2bQ7M6Y6 1581 aa12.91□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Fhad1A6PWD2 1420 aa12.9□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Naip2Q9QUK4 1447 aa12.9□□□□□ -0.34
Ccdc171-201ENSMUST00000053414 Cux1P53564 1515 aa12.9□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Efcab5A0JP43 1406 aa12.88□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Setd5Q5XJV7 1441 aa12.88□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Vps8Q0P5W1 1427 aa12.87□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Slc4a2P13808 1237 aaKnown RBP12.86□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Ercc6F8VPZ5 1481 aa12.85□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Arhgef12Q8R4H2 1543 aaKnown RBP12.85□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Gm1043A0A140LJC2 1431 aa12.85□□□□□ -0.35
Ccdc171-201ENSMUST00000053414 Arhgap27A2AB59 869 aa12.83□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Gm7298A0A0N4SVU1 1476 aa12.82□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 A2mQ6GQT1 1474 aa12.82□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Ncoa1P70365 1447 aa12.82□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Urb2E9Q7L1 1524 aaKnown RBP12.82□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 EprsQ8CGC7 1512 aaKnown RBP12.82□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Fgd1P52734 960 aa12.8□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Rtl5Q5DTT4 599 aa12.8□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Kif21bQ9QXL1 1668 aa12.8□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Grin2bQ01097 1482 aa12.8□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Ppp4r2Q0VGB7 417 aa12.8□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Upf2A2AT37 1269 aaKnown RBP12.79□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Kcnh8P59111 1102 aa12.79□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 4930567H17RikQ3V0K5 233 aa12.79□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Tubgcp6G5E8P0 1769 aa12.79□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Kcnn1Q9EQR3 537 aa12.78□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Pds5bQ4VA53 1446 aaKnown RBP12.77□□□□□ -0.36
Ccdc171-201ENSMUST00000053414 Frmpd1A2AKB4 1549 aa12.77□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Wdr43Q6ZQL4 677 aaKnown RBP12.76□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Wdr62Q3U3T8 1523 aa12.76□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Abca5Q8K448 1642 aa12.76□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 BlmO88700 1416 aa12.75□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Erbb3Q61526 1339 aa12.73□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Lmtk2Q3TYD6 1471 aa12.72□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Ak9G3UYQ4 1894 aa12.72□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Ccer2J3QPU5 274 aa12.72□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 NclP09405 707 aaKnown RBP12.71□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 L3mbtl2P59178 703 aa12.71□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Plcd4Q8K3R3 807 aa12.71□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 SynmQ70IV5 1561 aa12.71□□□□□ -0.37
Ccdc171-201ENSMUST00000053414 Kif14L0N7N1 1674 aaKnown RBP12.71□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Gtf3c3Q3TMP1 882 aa12.7□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Gcc2Q8CHG3 1679 aa12.69□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Fyco1Q8VDC1 1437 aa12.69□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 P3h3Q8CG70 732 aa12.69□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Atad2bE9Q166 1460 aaKnown RBP12.68□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Slc4a3P16283 1227 aa12.68□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Mbd5B1AYB6 1498 aa12.68□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 PnisrA2AJT4 805 aaKnown RBP12.67□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Plppr3Q7TPB0 716 aa12.67□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 SphkapQ6NSW3 1687 aa12.67□□□□□ -0.38
Ccdc171-201ENSMUST00000053414 Mink1Q9JM52 1308 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms