RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Zbtb12Q9Z150 459 aa8.93□□□□□ -0.98
Clk1-201ENSMUST00000034868 Rnf216P58283 853 aa8.91□□□□□ -0.98
Clk1-201ENSMUST00000034868 Map4k4P97820 1233 aaKnown RBP8.9□□□□□ -0.98
Clk1-201ENSMUST00000034868 UncxO08934 530 aa8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 Clcn6O35454 870 aa8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 Abcb7Q61102 752 aaKnown RBP8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 Lrrc43Q3V0L5 667 aa8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 Rsph6aQ8CDR2 708 aa8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 Pip4p2Q9CZX7 257 aa8.89□□□□□ -0.99
Clk1-201ENSMUST00000034868 ChgaP26339 463 aaKnown RBP8.87□□□□□ -0.99
Clk1-201ENSMUST00000034868 Scaf1Q5U4C3 1256 aaKnown RBP8.87□□□□□ -0.99
Clk1-201ENSMUST00000034868 Cnksr2Q80YA9 1032 aa8.87□□□□□ -0.99
Clk1-201ENSMUST00000034868 Fam117bQ3U3E2 584 aa8.86□□□□□ -0.99
Clk1-201ENSMUST00000034868 Gtpbp6Q3U6U5 514 aa8.86□□□□□ -0.99
Clk1-201ENSMUST00000034868 Npm1Q61937 292 aaKnown RBP8.83□□□□□ -1
Clk1-201ENSMUST00000034868 Ggt6Q6PDE7 497 aa8.83□□□□□ -1
Clk1-201ENSMUST00000034868 Repin1Q5U4E2 545 aa8.82□□□□□ -1
Clk1-201ENSMUST00000034868 Jarid2Q62315 1234 aa8.81□□□□□ -1
Clk1-201ENSMUST00000034868 Zc3h15Q3TIV5 426 aaKnown RBP8.8□□□□□ -1
Clk1-201ENSMUST00000034868 Hdac5Q9Z2V6 1113 aa8.78□□□□□ -1
Clk1-201ENSMUST00000034868 Pde4dQ01063 747 aa8.78□□□□□ -1
Clk1-201ENSMUST00000034868 Pelp1Q9DBD5 1123 aaKnown RBP8.78□□□□□ -1
Clk1-201ENSMUST00000034868 Ric3Q8BPM6 367 aa8.77□□□□□ -1.01
Clk1-201ENSMUST00000034868 Slc7a3P70423 618 aa8.76□□□□□ -1.01
Clk1-201ENSMUST00000034868 Kank3Q9Z1P7 791 aa8.74□□□□□ -1.01
Clk1-201ENSMUST00000034868 Arhgef1Q61210 920 aaKnown RBP8.73□□□□□ -1.01
Clk1-201ENSMUST00000034868 Dhx30Q99PU8 1217 aaKnown RBP8.73□□□□□ -1.01
Clk1-201ENSMUST00000034868 Stk3Q9JI10 497 aa8.73□□□□□ -1.01
Clk1-201ENSMUST00000034868 Stk25Q9Z2W1 426 aa8.73□□□□□ -1.01
Clk1-201ENSMUST00000034868 Rad21Q61550 635 aaKnown RBP8.72□□□□□ -1.01
Clk1-201ENSMUST00000034868 Ak7Q9D2H2 614 aa8.72□□□□□ -1.01
Clk1-201ENSMUST00000034868 Nkx1-1G3UXB3 402 aa8.69□□□□□ -1.02
Clk1-201ENSMUST00000034868 TprnA2AI08 749 aaKnown RBP8.68□□□□□ -1.02
Clk1-201ENSMUST00000034868 Evx2P49749 475 aa8.68□□□□□ -1.02
Clk1-201ENSMUST00000034868 Slc24a3Q99PD7 645 aa8.66□□□□□ -1.02
Clk1-201ENSMUST00000034868 Gm13697A2AK42 830 aa8.65□□□□□ -1.02
Clk1-201ENSMUST00000034868 Stk24Q99KH8 431 aa8.63□□□□□ -1.03
Clk1-201ENSMUST00000034868 Sra1Q80VJ2 232 aa8.62□□□□□ -1.03
Clk1-201ENSMUST00000034868 Brpf1B2RRD7 1212 aa8.61□□□□□ -1.03
Clk1-201ENSMUST00000034868 Chrm1P12657 460 aa8.61□□□□□ -1.03
Clk1-201ENSMUST00000034868 Apba2P98084 750 aa8.61□□□□□ -1.03
Clk1-201ENSMUST00000034868 Sgip1Q8VD37 806 aa8.58□□□□□ -1.04
Clk1-201ENSMUST00000034868 Foxp4Q9DBY0 795 aaKnown RBP8.58□□□□□ -1.04
Clk1-201ENSMUST00000034868 Fam117aQ7TNF9 451 aa8.56□□□□□ -1.04
Clk1-201ENSMUST00000034868 Rhox8Q6VSS7 320 aa8.56□□□□□ -1.04
Clk1-201ENSMUST00000034868 Myt1Q8CFC2 1127 aa8.56□□□□□ -1.04
Clk1-201ENSMUST00000034868 Zbtb7bQ64321 544 aa8.55□□□□□ -1.04
Clk1-201ENSMUST00000034868 Ccdc96Q9CR92 584 aa8.54□□□□□ -1.04
Clk1-201ENSMUST00000034868 Mier1Q5UAK0 511 aa8.53□□□□□ -1.04
Clk1-201ENSMUST00000034868 Bcl2l13P59017 434 aa8.53□□□□□ -1.04
Clk1-201ENSMUST00000034868 Hnrnpul2Q00PI9 745 aaKnown RBP8.51□□□□□ -1.05
Clk1-201ENSMUST00000034868 ArntlQ9WTL8 632 aa8.5□□□□□ -1.05
Clk1-201ENSMUST00000034868 Pitpnm1O35954 1243 aa8.5□□□□□ -1.05
Clk1-201ENSMUST00000034868 Gpr37l1Q99JG2 481 aa8.5□□□□□ -1.05
Clk1-201ENSMUST00000034868 Q8BT18 775 aa8.49□□□□□ -1.05
Clk1-201ENSMUST00000034868 Pdap1Q3UHX2 181 aaKnown RBP8.48□□□□□ -1.05
Clk1-201ENSMUST00000034868 PrimpolQ6P1E7 537 aa8.48□□□□□ -1.05
Clk1-201ENSMUST00000034868 Amer1Q7TS75 1132 aa8.48□□□□□ -1.05
Clk1-201ENSMUST00000034868 Atad2Q8CDM1 1040 aa8.48□□□□□ -1.05
Clk1-201ENSMUST00000034868 Cypt1Q8CH20 168 aa8.45□□□□□ -1.06
Clk1-201ENSMUST00000034868 Trim35Q8C006 501 aa8.43□□□□□ -1.06
Clk1-201ENSMUST00000034868 1700006A11RikB9EHI3 544 aa8.39□□□□□ -1.07
Clk1-201ENSMUST00000034868 E2f4Q8R0K9 410 aa8.39□□□□□ -1.07
Clk1-201ENSMUST00000034868 Nap1l5Q9JJF0 156 aa8.39□□□□□ -1.07
Clk1-201ENSMUST00000034868 PygbQ8CI94 843 aaKnown RBP8.38□□□□□ -1.07
Clk1-201ENSMUST00000034868 Ciz1Q8VEH2 845 aa8.36□□□□□ -1.07
Clk1-201ENSMUST00000034868 NclP09405 707 aaKnown RBP8.35□□□□□ -1.07
Clk1-201ENSMUST00000034868 Krtap4-1Q3UUY3 169 aa8.35□□□□□ -1.07
Clk1-201ENSMUST00000034868 Rtl5Q5DTT4 599 aa8.35□□□□□ -1.07
Clk1-201ENSMUST00000034868 Gm13695A2AK44 830 aa8.33□□□□□ -1.08
Clk1-201ENSMUST00000034868 Cadps2Q8BYR5 1297 aa8.33□□□□□ -1.08
Clk1-201ENSMUST00000034868 GopcQ8BH60 463 aa8.32□□□□□ -1.08
Clk1-201ENSMUST00000034868 Znf330Q922H9 316 aa8.32□□□□□ -1.08
Clk1-201ENSMUST00000034868 Pcdhb17Q91VD8 799 aa8.3□□□□□ -1.08
Clk1-201ENSMUST00000034868 Erich4Q3UNU4 136 aa8.3□□□□□ -1.08
Clk1-201ENSMUST00000034868 Slain2Q8CI08 581 aa8.29□□□□□ -1.08
Clk1-201ENSMUST00000034868 Neurod2Q62414 383 aa8.28□□□□□ -1.08
Clk1-201ENSMUST00000034868 Plcd4Q8K3R3 807 aa8.28□□□□□ -1.08
Clk1-201ENSMUST00000034868 Mink1Q9JM52 1308 aa8.27□□□□□ -1.08
Clk1-201ENSMUST00000034868 Mllt3A2AM29 569 aa8.27□□□□□ -1.09
Clk1-201ENSMUST00000034868 Rasgrp4Q8BTM9 673 aa8.27□□□□□ -1.09
Clk1-201ENSMUST00000034868 Irx6Q9ER75 438 aa8.27□□□□□ -1.09
Clk1-201ENSMUST00000034868 Lhx8O35652 367 aa8.26□□□□□ -1.09
Clk1-201ENSMUST00000034868 Nyap1Q6PFX7 833 aa8.26□□□□□ -1.09
Clk1-201ENSMUST00000034868 PrkcshO08795 521 aa8.25□□□□□ -1.09
Clk1-201ENSMUST00000034868 Pde8bE9Q4S1 865 aa8.25□□□□□ -1.09
Clk1-201ENSMUST00000034868 Ddx11Q6AXC6 880 aa8.25□□□□□ -1.09
Clk1-201ENSMUST00000034868 Speer2E9Q9U2 264 aa8.24□□□□□ -1.09
Clk1-201ENSMUST00000034868 Irf6P97431 467 aa8.23□□□□□ -1.09
Clk1-201ENSMUST00000034868 Tor1aip2Q8BYU6 502 aa8.22□□□□□ -1.09
Clk1-201ENSMUST00000034868 CrebzfQ91ZR3 358 aa8.22□□□□□ -1.09
Clk1-201ENSMUST00000034868 Fxr2Q9WVR4 673 aaKnown RBP8.22□□□□□ -1.09
Clk1-201ENSMUST00000034868 Secisbp2lQ6A098 1086 aaKnown RBP8.22□□□□□ -1.09
Clk1-201ENSMUST00000034868 Zbtb7cQ8VCZ7 619 aa8.22□□□□□ -1.09
Clk1-201ENSMUST00000034868 CenpbP27790 599 aa8.2□□□□□ -1.1
Clk1-201ENSMUST00000034868 Bcl11aQ9QYE3 773 aa8.2□□□□□ -1.1
Clk1-201ENSMUST00000034868 Kcnv2Q8CFS6 562 aa8.19□□□□□ -1.1
Clk1-201ENSMUST00000034868 Ncbp3Q8BZR9 615 aaKnown RBP8.18□□□□□ -1.1
Clk1-201ENSMUST00000034868 Sptlc1O35704 473 aa8.17□□□□□ -1.1
Clk1-201ENSMUST00000034868 Pcmtd1P59913 357 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms