RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Baz1bQ9Z277 1479 aa16.32■□□□□ 0.2
Ldb3-202ENSMUST00000022328 Efcab5A0JP43 1406 aa16.31■□□□□ 0.2
Ldb3-202ENSMUST00000022328 Npm1Q61937 292 aaKnown RBP16.28■□□□□ 0.2
Ldb3-202ENSMUST00000022328 Erich3F6QRE9 1637 aa16.28■□□□□ 0.2
Ldb3-202ENSMUST00000022328 Myt1Q8CFC2 1127 aa16.27■□□□□ 0.2
Ldb3-202ENSMUST00000022328 LrpprcQ6PB66 1392 aaKnown RBP16.27■□□□□ 0.2
Ldb3-202ENSMUST00000022328 Sall2Q9QX96 1004 aa16.26■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Ankrd26Q811D2 1581 aa16.26■□□□□ 0.19
Ldb3-202ENSMUST00000022328 PogzQ8BZH4 1409 aaKnown RBP16.25■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Tiam1Q60610 1591 aa16.25■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Csrnp3P59055 597 aa16.23■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Ap3b1Q9Z1T1 1105 aa16.22■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Duox2A2AQ99 1517 aa16.22■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Carmil1Q6EDY6 1374 aa16.21■□□□□ 0.19
Ldb3-202ENSMUST00000022328 Naip1Q9QWK5 1403 aa16.2■□□□□ 0.18
Ldb3-202ENSMUST00000022328 CenpbP27790 599 aa16.18■□□□□ 0.18
Ldb3-202ENSMUST00000022328 Pcf11G3X9Z4 1553 aa16.16■□□□□ 0.18
Ldb3-202ENSMUST00000022328 Lmo7E9PYF4 1699 aaKnown RBP16.15■□□□□ 0.18
Ldb3-202ENSMUST00000022328 Kdm5bQ80Y84 1544 aa16.15■□□□□ 0.18
Ldb3-202ENSMUST00000022328 TonslQ6NZL6 1363 aa16.15■□□□□ 0.18
Ldb3-202ENSMUST00000022328 Cux1P53564 1515 aa16.14■□□□□ 0.17
Ldb3-202ENSMUST00000022328 TchhA0A0B4J1F9 1599 aa16.12■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Aebp2Q9Z248 504 aaKnown RBP16.12■□□□□ 0.17
Ldb3-202ENSMUST00000022328 BlmO88700 1416 aa16.12■□□□□ 0.17
Ldb3-202ENSMUST00000022328 SynmQ70IV5 1561 aa16.11■□□□□ 0.17
Ldb3-202ENSMUST00000022328 CntlnA2AM05 1397 aa16.11■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Dhx29Q6PGC1 1365 aaKnown RBP16.11■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Slx4Q6P1D7 1565 aa16.11■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Aplp2Q06335 707 aa16.1■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Samd9lQ69Z37 1561 aa16.1■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Urb2E9Q7L1 1524 aaKnown RBP16.09■□□□□ 0.17
Ldb3-202ENSMUST00000022328 Hoxd11P23813 323 aa16.07■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Fyco1Q8VDC1 1437 aa16.07■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Atf5O70191 283 aa16.07■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Wdr66E9Q743 1299 aa16.06■□□□□ 0.16
Ldb3-202ENSMUST00000022328 ClspnQ80YR7 1315 aa16.06■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Peg3Q3URU2 1571 aa16.06■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Polr1aO35134 1717 aaKnown RBP16.05■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Rpap1Q80TE0 1409 aa16.04■□□□□ 0.16
Ldb3-202ENSMUST00000022328 Fam71e1A1L3C1 212 aa16.02■□□□□ 0.15
Ldb3-202ENSMUST00000022328 Crocc2F6XLV1 1638 aa16.01■□□□□ 0.15
Ldb3-202ENSMUST00000022328 Rad54l2Q99NG0 1466 aa16■□□□□ 0.15
Ldb3-202ENSMUST00000022328 Mrc2Q64449 1479 aa15.99■□□□□ 0.15
Ldb3-202ENSMUST00000022328 Aebp1Q640N1 1128 aa15.97■□□□□ 0.15
Ldb3-202ENSMUST00000022328 Kif21aQ9QXL2 1672 aa15.97■□□□□ 0.15
Ldb3-202ENSMUST00000022328 3425401B19RikD3Z1D3 1412 aa15.95■□□□□ 0.14
Ldb3-202ENSMUST00000022328 Gm1043A0A140LJC2 1431 aa15.94■□□□□ 0.14
Ldb3-202ENSMUST00000022328 Cdk11bP24788 784 aaKnown RBP15.94■□□□□ 0.14
Ldb3-202ENSMUST00000022328 Lmod2Q3UHZ5 550 aa15.94■□□□□ 0.14
Ldb3-202ENSMUST00000022328 Pla2r1Q62028 1487 aa15.93■□□□□ 0.14
Ldb3-202ENSMUST00000022328 EprsQ8CGC7 1512 aaKnown RBP15.92■□□□□ 0.14
Ldb3-202ENSMUST00000022328 Magi3Q9EQJ9 1476 aa15.89■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Eid3Q3V124 375 aa15.89■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Fhad1A6PWD2 1420 aa15.87■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Nop58Q6DFW4 536 aaKnown RBP15.87■□□□□ 0.13
Ldb3-202ENSMUST00000022328 CadpsQ80TJ1 1355 aa15.87■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Mia2Q91ZV0 1396 aa15.87■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Gm7298A0A0N4SVU1 1476 aa15.87■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Fam50aQ9WV03 339 aaKnown RBP15.86■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Abca5Q8K448 1642 aa15.86■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Grin2aP35436 1464 aa15.84■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Plb1Q3TTY0 1478 aa15.84■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Gpatch8A2A6A1 1505 aa15.84■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Vps8Q0P5W1 1427 aa15.83■□□□□ 0.13
Ldb3-202ENSMUST00000022328 Ccer2J3QPU5 274 aa15.83■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Disp1Q3TDN0 1521 aa15.82■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Naip2Q9QUK4 1447 aa15.82■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Lmtk2Q3TYD6 1471 aa15.81■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Dnajc5bQ9CQ94 199 aa15.8■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Adamts12Q811B3 1600 aa15.8■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Ankrd36D3Z4K0 1415 aa15.8■□□□□ 0.12
Ldb3-202ENSMUST00000022328 A2mQ6GQT1 1474 aa15.77■□□□□ 0.12
Ldb3-202ENSMUST00000022328 Soga1E1U8D0 1418 aa15.77■□□□□ 0.11
Ldb3-202ENSMUST00000022328 Ccnb3Q810T2 1396 aa15.76■□□□□ 0.11
Ldb3-202ENSMUST00000022328 WizO88286 1684 aaKnown RBP15.76■□□□□ 0.11
Ldb3-202ENSMUST00000022328 Kif27Q7M6Z4 1394 aa15.76■□□□□ 0.11
Ldb3-202ENSMUST00000022328 DiexfQ8BTT6 772 aaKnown RBP15.74■□□□□ 0.11
Ldb3-202ENSMUST00000022328 UacaQ8CGB3 1411 aa15.73■□□□□ 0.11
Ldb3-202ENSMUST00000022328 Ift140E9PY46 1464 aa15.73■□□□□ 0.11
Ldb3-202ENSMUST00000022328 Nup160Q9Z0W3 1402 aaKnown RBP15.71■□□□□ 0.11
Ldb3-202ENSMUST00000022328 Pbrm1Q8BSQ9 1634 aaKnown RBP15.7■□□□□ 0.1
Ldb3-202ENSMUST00000022328 PxdnQ3UQ28 1475 aa15.7■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Gcc2Q8CHG3 1679 aa15.7■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Setd1bQ8CFT2 1985 aa15.69■□□□□ 0.1
Ldb3-202ENSMUST00000022328 NexmifQ5DTT1 1515 aa15.69■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Gm38655A0A286YDK6 273 aa15.68■□□□□ 0.1
Ldb3-202ENSMUST00000022328 BC005561E9Q5E2 1589 aa15.68■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Dennd4bQ3U1Y4 1499 aa15.68■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Abca16E9PWJ7 1678 aa15.66■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Fhod3Q76LL6 1578 aa15.65■□□□□ 0.1
Ldb3-202ENSMUST00000022328 Hspa5P20029 655 aaKnown RBP15.63■□□□□ 0.09
Ldb3-202ENSMUST00000022328 WrnO09053 1401 aa15.63■□□□□ 0.09
Ldb3-202ENSMUST00000022328 NclP09405 707 aaKnown RBP15.61■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Rfx7F8VPJ6 1459 aa15.61■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Chic2Q9D9G3 165 aa15.6■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Bcl11aQ9QYE3 773 aa15.6■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Mug1P28665 1476 aa15.6■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Cul7Q8VE73 1689 aa15.6■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Camsap2Q8C1B1 1461 aa15.6■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Cc2d2bA0A286YDU8 1405 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms