RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ITSN1Q15811 1721 aa2.68□□□□□ -1.98
CHD9-214ENST00000565119 ABCA6Q8N139 1617 aa2.68□□□□□ -1.98
CHD9-214ENST00000565119 RAPGEF6Q8TEU7 1601 aa2.68□□□□□ -1.98
CHD9-214ENST00000565119 HEATR5BQ9P2D3 2071 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 TRAV12-3A0A0B4J271 114 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 A0A0G2JND7 137 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 TRBV10-1A0A0K0K1A3 114 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 TMEM30CPA0ZSE6 113 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 C2orf70A6NJV1 201 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 COX6CP09669 75 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 DEFB121Q5J5C9 76 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 Q5VV11 94 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 BPESC1Q9GZL8 116 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 MANBALQ9NQG1 85 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 MYOFQ9NZM1 2061 aa2.67□□□□□ -1.98
CHD9-214ENST00000565119 PLXNC1O60486 1568 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 MPDZO75970 2070 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 TRBV25-1A0A075B6N4 114 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 UMAD1C9J7I0 102 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 UBE2D1P51668 147 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 IFI27L1Q96BM0 104 aa2.66□□□□□ -1.98
CHD9-214ENST00000565119 MICAL3Q7RTP6 2002 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 SDHAF1A6NFY7 115 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 PRB4P10163 310 aaPredicted RBP2.65□□□□□ -1.99
CHD9-214ENST00000565119 C1orf137Q5JT78 98 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 XAF1Q6GPH4 301 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 Q6ZTI0 123 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 FAM223AQ8IWN6 122 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 CLECL1Q8IZS7 167 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 LYPD1Q8N2G4 141 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 C4orf3Q8WVX3 66 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 ZNF142P52746 1687 aaPredicted RBP2.65□□□□□ -1.99
CHD9-214ENST00000565119 AFDNP55196 1824 aaKnown RBP2.65□□□□□ -1.99
CHD9-214ENST00000565119 COL5A3P25940 1745 aaPredicted RBP2.65□□□□□ -1.99
CHD9-214ENST00000565119 ZGRF1Q86YA3 2104 aa2.65□□□□□ -1.99
CHD9-214ENST00000565119 NEXMIFQ5QGS0 1516 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 TMEM14DPA8MWL7 114 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 SFTA3P0C7M3 94 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 MDKP21741 143 aaPredicted RBP2.64□□□□□ -1.99
CHD9-214ENST00000565119 LY6EQ16553 131 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 C10orf128Q5T292 105 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 DMAC1Q96GE9 116 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 TOP2BQ02880 1626 aa2.64□□□□□ -1.99
CHD9-214ENST00000565119 KIAA0100Q14667 2235 aaKnown RBP2.64□□□□□ -1.99
CHD9-214ENST00000565119 COL4A5P29400 1685 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 A0A0J9YY99 117 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 LOC101927531A0A1B0GV80 90 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 HMGN2P05204 90 aaKnown RBP2.63□□□□□ -1.99
CHD9-214ENST00000565119 EDDM3BP56851 147 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 DYNLRB1Q9NP97 96 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 DOCK11Q5JSL3 2073 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 A0A1B0GUL6 1792 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 MED13Q9UHV7 2174 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 SLIT2O94813 1529 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 HMGXB3Q12766 1538 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 ASXL1Q8IXJ9 1541 aa2.63□□□□□ -1.99
CHD9-214ENST00000565119 DLG5Q8TDM6 1919 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 RNF17Q9BXT8 1623 aaKnown RBP2.62□□□□□ -1.99
CHD9-214ENST00000565119 NUPR2A6NF83 97 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 ZNF56Q15929 161 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 PSMG4Q5JS54 123 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 PRXQ9BXM0 1461 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 CUL9Q8IWT3 2517 aa2.62□□□□□ -1.99
CHD9-214ENST00000565119 TRAV40A0A0B4J280 105 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 TFF1P04155 84 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 ELOF1P60002 83 aaKnown RBP2.61□□□□□ -1.99
CHD9-214ENST00000565119 NDPQ00604 133 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 PATE1Q8WXA2 126 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 TVP23CQ96ET8 276 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 CCL26Q9Y258 94 aa2.61□□□□□ -1.99
CHD9-214ENST00000565119 PDCD11Q14690 1871 aaKnown RBP2.6□□□□□ -1.99
CHD9-214ENST00000565119 MYOM1P52179 1685 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 ITSN2Q9NZM3 1697 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 IGLV3-32A0A0A0MS00 114 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 CLPSL1A2RUU4 121 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 HIGD1CA8MV81 97 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 IGHV3-30P01768 117 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 IGHV3-30-5P0DP03 117 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 COX8AP10176 69 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 TMEM14BQ9NUH8 114 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 MRPL36Q9P0J6 103 aaKnown RBP2.6□□□□□ -1.99
CHD9-214ENST00000565119 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 LAMA4Q16363 1823 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 PIK3C2BO00750 1634 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 CFAP43Q8NDM7 1665 aa2.6□□□□□ -1.99
CHD9-214ENST00000565119 TOP2AP11388 1531 aaKnown RBP2.59□□□□□ -1.99
CHD9-214ENST00000565119 LOC285095A0A1B0GVY8 99 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 IQCF6A8MYZ5 107 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 CTSGP08311 255 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 HRES1P13985 223 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 Q86TA4 180 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 NDUFA4L2Q9NRX3 87 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 LENEPQ9Y5L5 61 aa2.59□□□□□ -1.99
CHD9-214ENST00000565119 XRN1Q8IZH2 1706 aaKnown RBP2.59□□□□□ -2
CHD9-214ENST00000565119 BAZ2BQ9UIF8 2168 aaKnown RBP2.59□□□□□ -2
CHD9-214ENST00000565119 CLASP1Q7Z460 1538 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms