RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 TEX49A0A1B0GTD5 131 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 KANTRA0A1W2PQU2 76 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 IGHV3-30P01768 117 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 IGHV3-30-5P0DP03 117 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 VMO1Q7Z5L0 202 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 IFT172Q9UG01 1749 aa5.37□□□□□ -1.55
LRP6-205ENST00000540527 IGKV3-7A0A075B6H7 116 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 TRAV22A0A0B4J277 110 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 Q8N6K4 173 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 DIP2AQ14689 1571 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 UGGT1Q9NYU2 1555 aa5.36□□□□□ -1.55
LRP6-205ENST00000540527 IGLV6-57P01721 117 aa5.35□□□□□ -1.55
LRP6-205ENST00000540527 KRTAP10-11P60412 298 aa5.35□□□□□ -1.55
LRP6-205ENST00000540527 Q5VV11 94 aa5.35□□□□□ -1.55
LRP6-205ENST00000540527 ZGRF1Q86YA3 2104 aa5.35□□□□□ -1.55
LRP6-205ENST00000540527 CEP350Q5VT06 3117 aa5.34□□□□□ -1.55
LRP6-205ENST00000540527 SNRPFP62306 86 aaKnown RBP5.34□□□□□ -1.55
LRP6-205ENST00000540527 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
LRP6-205ENST00000540527 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
LRP6-205ENST00000540527 VWDEQ8N2E2 1590 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 CPS1P31327 1500 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 AGLP35573 1532 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 A0A0D9SFI3 127 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 A0A0G2JND7 137 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 TRBV6-4A0A1B0GX49 114 aa5.33□□□□□ -1.56
LRP6-205ENST00000540527 PREX1Q8TCU6 1659 aa5.32□□□□□ -1.56
LRP6-205ENST00000540527 COX6CP09669 75 aa5.32□□□□□ -1.56
LRP6-205ENST00000540527 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
LRP6-205ENST00000540527 KIAA0556O60303 1618 aa5.32□□□□□ -1.56
LRP6-205ENST00000540527 COL16A1Q07092 1604 aaPredicted RBP5.31□□□□□ -1.56
LRP6-205ENST00000540527 SMIM11AP58511 58 aa5.31□□□□□ -1.56
LRP6-205ENST00000540527 LTBP2Q14767 1821 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 SDHAF1A6NFY7 115 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 F2Z2F3 143 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 H3BUT2 72 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 EDDM3BP56851 147 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 ADAMTS9Q9P2N4 1935 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 MROH2AA6NES4 1674 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 CLTCQ00610 1675 aaKnown RBP5.3□□□□□ -1.56
LRP6-205ENST00000540527 TMEM131LA2VDJ0 1609 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 PREX2Q70Z35 1606 aa5.3□□□□□ -1.56
LRP6-205ENST00000540527 C1orf167Q5SNV9 1468 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 PDE6GP18545 87 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 HMGN3Q15651 99 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 PMCHL1Q16048 86 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 PRR9Q5T870 116 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 HEPN1Q6WQI6 88 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
LRP6-205ENST00000540527 UNC13CQ8NB66 2214 aa5.28□□□□□ -1.56
LRP6-205ENST00000540527 GPR179Q6PRD1 2367 aa5.28□□□□□ -1.56
LRP6-205ENST00000540527 DEPDC5O75140 1603 aa5.28□□□□□ -1.56
LRP6-205ENST00000540527 CLPSL1A2RUU4 121 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 ACYP1P07311 99 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 ELOF1P60002 83 aaKnown RBP5.27□□□□□ -1.57
LRP6-205ENST00000540527 ZNF56Q15929 161 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 SPATA45Q537H7 98 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 C10orf55Q5SWW7 151 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 BAZ2BQ9UIF8 2168 aaKnown RBP5.27□□□□□ -1.57
LRP6-205ENST00000540527 SHANK1Q9Y566 2161 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 ZNF142P52746 1687 aaPredicted RBP5.27□□□□□ -1.57
LRP6-205ENST00000540527 COL4A6Q14031 1691 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 MYH4Q9Y623 1939 aa5.27□□□□□ -1.57
LRP6-205ENST00000540527 PHRF1Q9P1Y6 1649 aaKnown RBP5.26□□□□□ -1.57
LRP6-205ENST00000540527 PLXNA1Q9UIW2 1896 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 TMEM14DPA8MWL7 114 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 PPYP01298 95 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 IGLV3-1P01715 115 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 BRWD1Q9NSI6 2320 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 MRC1P22897 1456 aa5.26□□□□□ -1.57
LRP6-205ENST00000540527 SLIT1O75093 1534 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 TRBV25-1A0A075B6N4 114 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 A8MU10 97 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 HIGD1CA8MV81 97 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 RNASE3P12724 160 aaKnown RBP5.25□□□□□ -1.57
LRP6-205ENST00000540527 EFNA4P52798 201 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 FAM223AQ8IWN6 122 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 DYNLRB1Q9NP97 96 aa5.25□□□□□ -1.57
LRP6-205ENST00000540527 XRN1Q8IZH2 1706 aaKnown RBP5.24□□□□□ -1.57
LRP6-205ENST00000540527 H3BRN7 92 aa5.24□□□□□ -1.57
LRP6-205ENST00000540527 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
LRP6-205ENST00000540527 SPAG17Q6Q759 2223 aa5.24□□□□□ -1.57
LRP6-205ENST00000540527 KCPQ6ZWJ8 1503 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 TULP4Q9NRJ4 1543 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 LINC00315P59091 139 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 NDUFA4L2Q9NRX3 87 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 LENEPQ9Y5L5 61 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 CD163L1Q9NR16 1453 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 CEP192Q8TEP8 1941 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 DOCK2Q92608 1830 aa5.23□□□□□ -1.57
LRP6-205ENST00000540527 ARFGEF3Q5TH69 2177 aa5.22□□□□□ -1.57
LRP6-205ENST00000540527 TRBV6-7A0A0A0MS04 114 aa5.22□□□□□ -1.57
LRP6-205ENST00000540527 CFAP126Q5VTH2 177 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms