RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 FAM167A-AS1Q96KT0 104 aa1.97□□□□□ -2.09
KDM3A-213ENST00000488971 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
KDM3A-213ENST00000488971 PRO1854Q9UHT4 67 aa1.97□□□□□ -2.09
KDM3A-213ENST00000488971 MYO5CQ9NQX4 1742 aa1.97□□□□□ -2.09
KDM3A-213ENST00000488971 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
KDM3A-213ENST00000488971 EFCAB6Q5THR3 1501 aa1.96□□□□□ -2.09
KDM3A-213ENST00000488971 ATP7BP35670 1465 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 TRBV7-3A0A075B6L6 115 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 COX6CP09669 75 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 EDDM3BP56851 147 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 UBE2D3P61077 147 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 SNRPFP62306 86 aaKnown RBP1.96□□□□□ -2.1
KDM3A-213ENST00000488971 CNBPP62633 177 aaKnown RBP1.96□□□□□ -2.1
KDM3A-213ENST00000488971 UBE2D2P62837 147 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 HEPN1Q6WQI6 88 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 Q8N6K4 173 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 HIGD1BQ9P298 99 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 CUL9Q8IWT3 2517 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 KNDC1Q76NI1 1749 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 PLXNA1Q9UIW2 1896 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 ABCC1P33527 1531 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 ABCC2Q92887 1545 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 DOCK2Q92608 1830 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 CASP8AP2Q9UKL3 1982 aa1.96□□□□□ -2.1
KDM3A-213ENST00000488971 TRBV6-8A0A0A6YYG3 113 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 TEX49A0A1B0GTD5 131 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 F2Z2F3 143 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 H7BZZ5 65 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 UBE2D1P51668 147 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 VMO1Q7Z5L0 202 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 PATE1Q8WXA2 126 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 MRPL36Q9P0J6 103 aaKnown RBP1.95□□□□□ -2.1
KDM3A-213ENST00000488971 CFAP43Q8NDM7 1665 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 HMGXB3Q12766 1538 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.95□□□□□ -2.1
KDM3A-213ENST00000488971 PREX2Q70Z35 1606 aa1.95□□□□□ -2.1
KDM3A-213ENST00000488971 PCNX2A6NKB5 2137 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 UBR1Q8IWV7 1749 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 SETBP1Q9Y6X0 1596 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 E9PCH4 1651 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 ZNF142P52746 1687 aaPredicted RBP1.94□□□□□ -2.1
KDM3A-213ENST00000488971 TRAV22A0A0B4J277 110 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 ACYP1P07311 99 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 SFTA2Q6UW10 78 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 ODF3Q96PU9 254 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 EFCAB5A4FU69 1503 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 CUX1P39880 1505 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 KCPQ6ZWJ8 1503 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 SYCP2Q9BX26 1530 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 A0A1B0GUL6 1792 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 FREM3P0C091 2139 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 ABCA9Q8IUA7 1624 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 MPDZO75970 2070 aa1.94□□□□□ -2.1
KDM3A-213ENST00000488971 COL4A5P29400 1685 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 ADAMTS7Q9UKP4 1686 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 ABCC6O95255 1503 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 RNF17Q9BXT8 1623 aaKnown RBP1.93□□□□□ -2.1
KDM3A-213ENST00000488971 SDHAF1A6NFY7 115 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 BCE1O60756 84 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 Q5VV11 94 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 C18orf32Q8TCD1 76 aa1.93□□□□□ -2.1
KDM3A-213ENST00000488971 MYO18AQ92614 2054 aaKnown RBP1.92□□□□□ -2.1
KDM3A-213ENST00000488971 KIF21BO75037 1637 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 MADDQ8WXG6 1647 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 IGKV3-7A0A075B6H7 116 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 A0A0J9YY99 117 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 PPYP01298 95 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 EFNA4P52798 201 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 TMEM170BQ5T4T1 132 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 LINC00643Q86TS7 51 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 FAM223AQ8IWN6 122 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 DYNLRB1Q9NP97 96 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 LRRC9Q6ZRR7 1453 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 KIF1AQ12756 1690 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 RGPD8O14715 1765 aaPredicted RBP1.92□□□□□ -2.1
KDM3A-213ENST00000488971 RGPD5Q99666 1765 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 HEATR5BQ9P2D3 2071 aa1.92□□□□□ -2.1
KDM3A-213ENST00000488971 ADCY10Q96PN6 1610 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 NINQ8N4C6 2090 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 EXPH5Q8NEV8 1989 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 STRCP1A6NGW2 1772 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 WIZO95785 1651 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 DIP2CQ9Y2E4 1556 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 TRBV25-1A0A075B6N4 114 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 ELOF1P60002 83 aaKnown RBP1.91□□□□□ -2.1
KDM3A-213ENST00000488971 ZNF56Q15929 161 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 XAF1Q6GPH4 301 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 LINC01600Q96MT4 127 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 BPESC1Q9GZL8 116 aa1.91□□□□□ -2.1
KDM3A-213ENST00000488971 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms