RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 Q6ZSN1 163 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 DEFB104AQ8WTQ1 72 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 LINC01587Q99440 93 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 SPANXDQ9BXN6 97 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 SPANXCQ9NY87 97 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 ZFHX3Q15911 3703 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 SVEP1Q4LDE5 3571 aa9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 IGLV5-45A0A087WSX0 123 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 IGHV3-30-3P0DP02 117 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 TIRAPP58753 221 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 LITAFQ99732 161 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 TIMM17BO60830 172 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 APOMO95445 188 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 SCGB1A1P11684 91 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 TMEM263Q8WUH6 116 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-209ENST00000454591 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 DNAJC9-AS1A6NH13 148 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 C1QTNF4Q9BXJ3 329 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 C16orf95Q9H693 158 aa9.04□□□□□ -0.96
ECHDC1-209ENST00000454591 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 A4D1N5 150 aa9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 CSDC2Q9Y534 153 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 VPS13CQ709C8 3753 aa9.03□□□□□ -0.96
ECHDC1-209ENST00000454591 SORL1Q92673 2214 aa9.02□□□□□ -0.97
ECHDC1-209ENST00000454591 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-209ENST00000454591 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
ECHDC1-209ENST00000454591 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-209ENST00000454591 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.97
ECHDC1-209ENST00000454591 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 CCL24O00175 119 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 CIDEAO60543 219 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 TCL1BO95988 128 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 HTN1P15515 57 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 KHDC1LQ5JSQ8 128 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 STHQ8IWL8 128 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 Q9UF83 564 aa9.01□□□□□ -0.97
ECHDC1-209ENST00000454591 PRM2P04554 102 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 PSMB2P49721 201 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 FOXI1Q12951 378 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 Q6ZUT4 128 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 FAM208BQ5VWN6 2430 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 IFITM1P13164 125 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 AZU1P20160 251 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 SMAGPQ0VAQ4 97 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 DAZ2Q13117 558 aaKnown RBP9□□□□□ -0.97
ECHDC1-209ENST00000454591 TEN1Q86WV5 123 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 ERG28Q9UKR5 140 aa9□□□□□ -0.97
ECHDC1-209ENST00000454591 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
ECHDC1-209ENST00000454591 MYO18BQ8IUG5 2567 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 RNASE1P07998 156 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 MIAQ16674 131 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 CEMP1Q6PRD7 247 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 PPDPFLQ8WWR9 84 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 YAE1D1Q9NRH1 226 aa8.99□□□□□ -0.97
ECHDC1-209ENST00000454591 MXRA5Q9NR99 2828 aa8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 NDUFA1O15239 70 aa8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 KRTAP1-1Q07627 177 aa8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 XCL2Q9UBD3 114 aa8.98□□□□□ -0.97
ECHDC1-209ENST00000454591 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 TRAV8-3A0A0A6YYJ7 113 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 K7EQD1 137 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 HERVK_113P63121 156 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 WFDC11Q8NEX6 87 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 ZANQ9Y493 2812 aa8.97□□□□□ -0.97
ECHDC1-209ENST00000454591 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.97
ECHDC1-209ENST00000454591 IGHV3OR16-12A0A075B7B8 117 aa8.96□□□□□ -0.97
ECHDC1-209ENST00000454591 CRYBG3Q68DQ2 2970 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms