RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 MAP1AP78559 2803 aaPredicted RBP7.47□□□□□ -1.21
C2CD3-204ENST00000414160 A8MZ25 164 aa7.47□□□□□ -1.21
C2CD3-204ENST00000414160 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
C2CD3-204ENST00000414160 VPS13CQ709C8 3753 aa7.47□□□□□ -1.21
C2CD3-204ENST00000414160 IGHV1OR15-1A0A075B7D0 117 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 IGLV1-40P01703 118 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 NPC2P61916 151 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.22
C2CD3-204ENST00000414160 CLEC2BQ92478 149 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 SORL1Q92673 2214 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 K7EMT4 169 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 SPINK13Q1W4C9 94 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
C2CD3-204ENST00000414160 IGHV1-58A0A0C4DH39 117 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 H3BUX3 64 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 CD28P10747 220 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 PROK1P58294 105 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 PYGO1Q9Y3Y4 419 aa7.45□□□□□ -1.22
C2CD3-204ENST00000414160 PRRC2AP48634 2157 aaKnown RBP7.45□□□□□ -1.22
C2CD3-204ENST00000414160 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 Q9UF83 564 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 ZFYVE26Q68DK2 2539 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 A6NDX4 124 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 MIAQ16674 131 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 ABCA2Q9BZC7 2435 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
C2CD3-204ENST00000414160 H3BT86 120 aa7.43□□□□□ -1.22
C2CD3-204ENST00000414160 COX6CP09669 75 aa7.43□□□□□ -1.22
C2CD3-204ENST00000414160 VSIG2Q96IQ7 327 aa7.43□□□□□ -1.22
C2CD3-204ENST00000414160 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
C2CD3-204ENST00000414160 TMEM61Q8N0U2 210 aa7.43□□□□□ -1.22
C2CD3-204ENST00000414160 LST1O00453 97 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 DOPEY2Q9Y3R5 2298 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
C2CD3-204ENST00000414160 CFHR3Q02985 330 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 DEFB121Q5J5C9 76 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 DAND5Q8N907 189 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 ZNF462Q96JM2 2506 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 HIVEP3Q5T1R4 2406 aa7.42□□□□□ -1.22
C2CD3-204ENST00000414160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.221e-5■■■■□ 21.5
C2CD3-204ENST00000414160 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 K7EQG2 157 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 HTN1P15515 57 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 TRGV11A0A075B6L2 103 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 PRM2P04554 102 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 RBMY1A1P0DJD3 496 aaKnown RBP7.41□□□□□ -1.22
C2CD3-204ENST00000414160 RBMY1CP0DJD4 496 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 RBMY1FQ15415 496 aaKnown RBP7.41□□□□□ -1.22
C2CD3-204ENST00000414160 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
C2CD3-204ENST00000414160 Q6ZSN1 163 aa7.41□□□□□ -1.22
C2CD3-204ENST00000414160 IGHV4-61A0A0C4DH41 118 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 KNCNA6PVL3 124 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 C10orf99Q6UWK7 81 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 CHD6Q8TD26 2715 aa7.4□□□□□ -1.22
C2CD3-204ENST00000414160 FAM240AA0A1B0GVK7 77 aa7.4□□□□□ -1.23
C2CD3-204ENST00000414160 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.23
C2CD3-204ENST00000414160 CITED2Q99967 270 aaPredicted RBP7.4□□□□□ -1.23
C2CD3-204ENST00000414160 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.23
C2CD3-204ENST00000414160 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-204ENST00000414160 IGKV2-29A2NJV5 120 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-204ENST00000414160 MEIG1Q5JSS6 88 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 EDA2RQ9HAV5 297 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 UBR5O95071 2799 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-204ENST00000414160 C19orf84I3L1E1 186 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 PSMB8P28062 276 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 YAE1D1Q9NRH1 226 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
C2CD3-204ENST00000414160 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.38□□□□□ -1.23
C2CD3-204ENST00000414160 CRYBG3Q68DQ2 2970 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 CSPG4Q6UVK1 2322 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 TRBV7-7A0A0K0K1E9 115 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 TIMM17BO60830 172 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 DUX5Q96PT3 197 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 SPANXA1Q9NS26 97 aa7.38□□□□□ -1.23
C2CD3-204ENST00000414160 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 SYNJ2BPP57105 145 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 HERV-K104P63124 156 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 RNF152Q8N8N0 203 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 FAM110AQ9BQ89 295 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 DOPEY1Q5JWR5 2465 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
C2CD3-204ENST00000414160 SHISA2Q6UWI4 295 aa7.36□□□□□ -1.23
C2CD3-204ENST00000414160 C3orf56Q8N813 242 aa7.36□□□□□ -1.23
C2CD3-204ENST00000414160 NDUFA1O15239 70 aa7.36□□□□□ -1.23
C2CD3-204ENST00000414160 COX6A2Q02221 97 aa7.36□□□□□ -1.23
C2CD3-204ENST00000414160 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
C2CD3-204ENST00000414160 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
C2CD3-204ENST00000414160 AVPP01185 164 aa7.35□□□□□ -1.23
C2CD3-204ENST00000414160 Q8N2B8 174 aa7.35□□□□□ -1.23
C2CD3-204ENST00000414160 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
C2CD3-204ENST00000414160 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 317.3 ms