RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 CKS1BP61024 79 aa-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 CTAGE3PQ8IX95 158 aa-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 SMIM3Q9BZL3 60 aa-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 FLNBO75369 2602 aaKnown RBP-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 CEP152O94986 1710 aa-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 ANKRD30AQ9BXX3 1397 aa-0.58□□□□□ -2.5
RNU2-39P-201ENST00000410604 ZNF818PQ6ZRF7 136 aa-0.59□□□□□ -2.5
RNU2-39P-201ENST00000410604 PYDC1Q8WXC3 89 aa-0.59□□□□□ -2.5
RNU2-39P-201ENST00000410604 NBEAL1Q6ZS30 2694 aa-0.59□□□□□ -2.5
RNU2-39P-201ENST00000410604 ZNF236Q9UL36 1845 aa-0.59□□□□□ -2.5
RNU2-39P-201ENST00000410604 LAMC1P11047 1609 aa-0.6□□□□□ -2.5
RNU2-39P-201ENST00000410604 ZNF609O15014 1411 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 FAM92AA1XBS5 289 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 IL5P05113 134 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 PIPP12273 146 aaPredicted RBP-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 SPRR1AP35321 89 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 BAGE3Q86Y29 109 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 Q8IZM0 81 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 PSMG3Q9BT73 122 aaPredicted RBP-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 GSKIPQ9P0R6 139 aa-0.6□□□□□ -2.51
RNU2-39P-201ENST00000410604 STAB2Q8WWQ8 2551 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 J3QR89 54 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 SMIM6P0DI80 62 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 CBLN1P23435 193 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 KRTAP19-7Q3SYF9 63 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 CFAP126Q5VTH2 177 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 SPTSSBQ8NFR3 76 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 NPVFQ9HCQ7 196 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 SPCS1Q9Y6A9 102 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 CHD8Q9HCK8 2581 aa-0.61□□□□□ -2.51
RNU2-39P-201ENST00000410604 FHAD1B1AJZ9 1412 aa-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 RRAS2P62070 204 aaPredicted RBP-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 AKAP14Q86UN6 197 aa-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 SCN3BQ9NY72 215 aa-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 LINC00312Q9Y6C7 94 aa-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 PXDNQ92626 1479 aa-0.62□□□□□ -2.51
RNU2-39P-201ENST00000410604 CASKIN1Q8WXD9 1431 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 PRKDCP78527 4128 aaKnown RBP-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 SBF2Q86WG5 1849 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 M0R2Z0 102 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 NPFFO15130 113 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 ARPC5O15511 151 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 SCIMPQ6UWF3 145 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 SPTSSAQ969W0 71 aa-0.63□□□□□ -2.51
RNU2-39P-201ENST00000410604 LRP6O75581 1613 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 LRRC37A2A6NM11 1700 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 TSC2P49815 1807 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 NDUFB6O95139 128 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 CCL18P55774 89 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 CCL8P80075 99 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 DR1Q01658 176 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 S100A7L2Q5SY68 101 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 EP300Q09472 2414 aaPredicted RBP-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 MYH7P12883 1935 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 UNC13AQ9UPW8 1703 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 C10orf71Q711Q0 1435 aa-0.64□□□□□ -2.51
RNU2-39P-201ENST00000410604 BCL9LQ86UU0 1499 aa-0.65□□□□□ -2.51
RNU2-39P-201ENST00000410604 K7ERU9 68 aa-0.65□□□□□ -2.51
RNU2-39P-201ENST00000410604 BCE1O60756 84 aa-0.65□□□□□ -2.51
RNU2-39P-201ENST00000410604 ALX1Q15699 326 aa-0.65□□□□□ -2.51
RNU2-39P-201ENST00000410604 GOLGA4Q13439 2230 aaKnown RBP-0.65□□□□□ -2.51
RNU2-39P-201ENST00000410604 ERCC6L2Q5T890 1561 aa-0.66□□□□□ -2.51
RNU2-39P-201ENST00000410604 FXYD6-FXYD2A0A087WZ82 144 aa-0.66□□□□□ -2.52
RNU2-39P-201ENST00000410604 SNCGO76070 127 aa-0.66□□□□□ -2.52
RNU2-39P-201ENST00000410604 HAMPP81172 84 aa-0.66□□□□□ -2.52
RNU2-39P-201ENST00000410604 ARAP2Q8WZ64 1704 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 NF1P21359 2839 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 GUCA1AP43080 201 aaPredicted RBP-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 LZICQ8WZA0 190 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 SEC11CQ9BY50 192 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 ZFHX3Q15911 3703 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 ZNF518AQ6AHZ1 1483 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 IFT140Q96RY7 1462 aa-0.67□□□□□ -2.52
RNU2-39P-201ENST00000410604 TCHHQ07283 1943 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 K7EQZ3 153 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 S100A3P33764 101 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 SPRR2BP35325 72 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 DCDP81605 110 aaKnown RBP-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 TSTD1Q8NFU3 115 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 TP53AIP1Q9HCN2 124 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 CNOT1A5YKK6 2376 aaKnown RBP-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 MRC1P22897 1456 aa-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 URB1O60287 2271 aaKnown RBP-0.68□□□□□ -2.52
RNU2-39P-201ENST00000410604 MYOM3Q5VTT5 1437 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 SIX6O95475 246 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 KCNRGQ8N5I3 272 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 SDF2Q99470 211 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 COPZ2Q9P299 210 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 LRP1BQ9NZR2 4599 aa-0.69□□□□□ -2.52
RNU2-39P-201ENST00000410604 TGP01266 2768 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 PSME4Q14997 1843 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 SPAARA0A1B0GVQ0 90 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 PPP1R17O96001 155 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 COPZ1P61923 177 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 RPS25P62851 125 aaKnown RBP-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 AGPAT4-IT1Q9H0P7 198 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 TPT1P8Q9HAU6 139 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 R4GMQ9 66 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 KIF21AQ7Z4S6 1674 aa-0.7□□□□□ -2.52
RNU2-39P-201ENST00000410604 PAPPAQ13219 1627 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms