RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 RS1O15537 224 aa9.56□□□□□ -0.88
ECM1-202ENST00000369047 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
ECM1-202ENST00000369047 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
ECM1-202ENST00000369047 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
ECM1-202ENST00000369047 PHLDA1Q8WV24 401 aaPredicted RBP9.56□□□□□ -0.88
ECM1-202ENST00000369047 NIPBLQ6KC79 2804 aaeCLIP9.56□□□□□ -0.88
ECM1-202ENST00000369047 JMJD1CQ15652 2540 aa9.56□□□□□ -0.88
ECM1-202ENST00000369047 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 FABP2P12104 132 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 C11orf44Q8N8P7 122 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 FAM110AQ9BQ89 295 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 VCX2Q9H322 139 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
ECM1-202ENST00000369047 NF1P21359 2839 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 GAGE12BA1L429 117 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 PROK1P58294 105 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
ECM1-202ENST00000369047 IGHV3-73A0A0B4J1V6 119 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 MDFIQ99750 246 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 XCL2Q9UBD3 114 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 IGLV4-3A0A075B6K6 122 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 A0A1B0GWB2 263 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 PRM2P04554 102 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 C12orf74Q32Q52 190 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
ECM1-202ENST00000369047 TMEM238LA0A1B0GVL6 79 aa9.53□□□□□ -0.88
ECM1-202ENST00000369047 A6NJY4 79 aa9.53□□□□□ -0.88
ECM1-202ENST00000369047 EMP1P54849 157 aa9.53□□□□□ -0.88
ECM1-202ENST00000369047 C1orf158Q8N1D5 194 aa9.53□□□□□ -0.88
ECM1-202ENST00000369047 SVIPQ8NHG7 77 aa9.52□□□□□ -0.88
ECM1-202ENST00000369047 AMELXQ99217 191 aa9.52□□□□□ -0.88
ECM1-202ENST00000369047 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.88
ECM1-202ENST00000369047 LEPROTO15243 131 aa9.52□□□□□ -0.89
ECM1-202ENST00000369047 Q6ZSN1 163 aa9.52□□□□□ -0.89
ECM1-202ENST00000369047 IL17DQ8TAD2 202 aa9.52□□□□□ -0.89
ECM1-202ENST00000369047 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
ECM1-202ENST00000369047 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
ECM1-202ENST00000369047 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
ECM1-202ENST00000369047 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 J3QQQ9 107 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 SAP30O75446 220 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 IGLV1-51P01701 117 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
ECM1-202ENST00000369047 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
ECM1-202ENST00000369047 NACAE9PAV3 2078 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 IGLL5B9A064 214 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
ECM1-202ENST00000369047 AZU1P20160 251 aa9.51□□□□□ -0.89
ECM1-202ENST00000369047 NAA38Q9BRA0 125 aaKnown RBP9.51□□□□□ -0.89
ECM1-202ENST00000369047 A0A0J9YY99 117 aa9.5□□□□□ -0.89
ECM1-202ENST00000369047 K7ERJ3 54 aa9.5□□□□□ -0.89
ECM1-202ENST00000369047 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
ECM1-202ENST00000369047 TMEM263Q8WUH6 116 aaKnown RBP9.5□□□□□ -0.89
ECM1-202ENST00000369047 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
ECM1-202ENST00000369047 CBY1Q9Y3M2 126 aa9.5□□□□□ -0.89
ECM1-202ENST00000369047 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
ECM1-202ENST00000369047 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
ECM1-202ENST00000369047 COTL1Q14019 142 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 SLC25A29Q8N8R3 303 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 PLEKHB2Q96CS7 222 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 CITED1Q99966 193 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
ECM1-202ENST00000369047 IGHV3OR16-12A0A075B7B8 117 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
ECM1-202ENST00000369047 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 CIDEAO60543 219 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
ECM1-202ENST00000369047 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 TSPEAR-AS2P59090 65 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
ECM1-202ENST00000369047 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.89
ECM1-202ENST00000369047 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.89
ECM1-202ENST00000369047 Q9UF83 564 aa9.46□□□□□ -0.89
ECM1-202ENST00000369047 K7ERU9 68 aa9.46□□□□□ -0.9
ECM1-202ENST00000369047 UBE2D1P51668 147 aa9.46□□□□□ -0.9
ECM1-202ENST00000369047 C16orf74Q96GX8 76 aa9.46□□□□□ -0.9
ECM1-202ENST00000369047 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
ECM1-202ENST00000369047 ATRQ13535 2644 aa9.45□□□□□ -0.9
ECM1-202ENST00000369047 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
ECM1-202ENST00000369047 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
ECM1-202ENST00000369047 CUBNO60494 3623 aa9.45□□□□□ -0.9
ECM1-202ENST00000369047 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
ECM1-202ENST00000369047 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
ECM1-202ENST00000369047 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
ECM1-202ENST00000369047 PCP4P48539 62 aa9.44□□□□□ -0.9
ECM1-202ENST00000369047 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
ECM1-202ENST00000369047 RBX1P62877 108 aa9.44□□□□□ -0.9
ECM1-202ENST00000369047 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms