RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 PSMB8P28062 276 aa12.24□□□□□ -0.45
SHTN1-202ENST00000355371 NREPQ16612 68 aa12.24□□□□□ -0.45
SHTN1-202ENST00000355371 MED12LQ86YW9 2145 aa12.24□□□□□ -0.45
SHTN1-202ENST00000355371 ATOX1O00244 68 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 NDUFS5O43920 106 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 M0QY20 66 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 UFSP1Q6NVU6 142 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 PCNX3Q9H6A9 2034 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
SHTN1-202ENST00000355371 PDE6GP18545 87 aa12.22□□□□□ -0.45
SHTN1-202ENST00000355371 UBE2AP49459 152 aa12.22□□□□□ -0.45
SHTN1-202ENST00000355371 REG3AQ06141 175 aa12.22□□□□□ -0.45
SHTN1-202ENST00000355371 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
SHTN1-202ENST00000355371 NDUFB1O75438 58 aa12.22□□□□□ -0.45
SHTN1-202ENST00000355371 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
SHTN1-202ENST00000355371 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
SHTN1-202ENST00000355371 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
SHTN1-202ENST00000355371 ZNF843Q8N446 348 aa12.21□□□□□ -0.45
SHTN1-202ENST00000355371 IL17DQ8TAD2 202 aa12.21□□□□□ -0.45
SHTN1-202ENST00000355371 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
SHTN1-202ENST00000355371 LINC00269Q8N2A0 174 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 ZNF702PQ9H963 129 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
SHTN1-202ENST00000355371 IGKV3D-7A0A0C4DH55 119 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 COX7BP24311 80 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
SHTN1-202ENST00000355371 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
SHTN1-202ENST00000355371 NACAE9PAV3 2078 aa12.2□□□□□ -0.46
SHTN1-202ENST00000355371 TMEM258P61165 79 aa12.19□□□□□ -0.46
SHTN1-202ENST00000355371 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
SHTN1-202ENST00000355371 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
SHTN1-202ENST00000355371 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
SHTN1-202ENST00000355371 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 G3V4G9 280 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 CEP192Q8TEP8 1941 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 TCL1BO95988 128 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 MIFP14174 115 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 CHCHD10Q8WYQ3 142 aaPredicted RBP12.18□□□□□ -0.46
SHTN1-202ENST00000355371 PYGO1Q9Y3Y4 419 aa12.18□□□□□ -0.46
SHTN1-202ENST00000355371 IGLV1-40P01703 118 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 CUL9Q8IWT3 2517 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 A0A1B0GX51 115 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 HIGD2BQ4VC39 106 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 ARHGAP21Q5T5U3 1957 aa12.17□□□□□ -0.46
SHTN1-202ENST00000355371 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
SHTN1-202ENST00000355371 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
SHTN1-202ENST00000355371 B5MCH6 92 aa12.16□□□□□ -0.46
SHTN1-202ENST00000355371 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
SHTN1-202ENST00000355371 SMIM20Q8N5G0 67 aa12.16□□□□□ -0.46
SHTN1-202ENST00000355371 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
SHTN1-202ENST00000355371 OTOGLQ3ZCN5 2332 aa12.15□□□□□ -0.46
SHTN1-202ENST00000355371 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
SHTN1-202ENST00000355371 INAFM1C9JVW0 142 aa12.15□□□□□ -0.46
SHTN1-202ENST00000355371 MP68P56378 58 aa12.15□□□□□ -0.46
SHTN1-202ENST00000355371 KLLNB2CW77 178 aa12.15□□□□□ -0.46
SHTN1-202ENST00000355371 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
SHTN1-202ENST00000355371 SHISA2Q6UWI4 295 aa12.13□□□□□ -0.47
SHTN1-202ENST00000355371 HILS1P60008 231 aa12.13□□□□□ -0.47
SHTN1-202ENST00000355371 NRACQ8N912 160 aa12.13□□□□□ -0.47
SHTN1-202ENST00000355371 PTH2Q96A98 100 aa12.13□□□□□ -0.47
SHTN1-202ENST00000355371 LINC00643Q86TS7 51 aa12.12□□□□□ -0.47
SHTN1-202ENST00000355371 LINC00308Q8TCZ7 52 aa12.12□□□□□ -0.47
SHTN1-202ENST00000355371 SPATA25Q9BR10 227 aa12.12□□□□□ -0.47
SHTN1-202ENST00000355371 LRP4O75096 1905 aa12.12□□□□□ -0.47
SHTN1-202ENST00000355371 DEFB131BA0A096LNP1 70 aa12.11□□□□□ -0.47
SHTN1-202ENST00000355371 DSCAMO60469 2012 aa12.11□□□□□ -0.47
SHTN1-202ENST00000355371 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
SHTN1-202ENST00000355371 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
SHTN1-202ENST00000355371 LINC01006Q8NI28 216 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 PRR9Q5T870 116 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 TSHBP01222 138 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 CRYGDP07320 174 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 C14orf132Q9NPU4 83 aa12.1□□□□□ -0.47
SHTN1-202ENST00000355371 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 TIMM17BO60830 172 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 PROK1P58294 105 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 TNCP24821 2201 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
SHTN1-202ENST00000355371 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
SHTN1-202ENST00000355371 TRBV30A0A0K0K1B3 111 aa12.08□□□□□ -0.48
SHTN1-202ENST00000355371 LY6G6DO95868 133 aa12.08□□□□□ -0.48
SHTN1-202ENST00000355371 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
SHTN1-202ENST00000355371 SS18L2Q9UHA2 77 aa12.07□□□□□ -0.48
SHTN1-202ENST00000355371 CDSNQ15517 529 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 TP73-AS1Q9UF72 201 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 NOTCH2Q04721 2471 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 MRPS36P82909 103 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms