RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 C11orf21Q9P2W6 132 aa14.47□□□□□ -0.09
TSR1-201ENST00000301364 JMJD7-PLA2G4BH0Y9G9 81 aa14.47□□□□□ -0.09
TSR1-201ENST00000301364 DSCAML1Q8TD84 2053 aa14.47□□□□□ -0.09
TSR1-201ENST00000301364 H3BQ85 93 aa14.46□□□□□ -0.09
TSR1-201ENST00000301364 RBX1P62877 108 aa14.46□□□□□ -0.09
TSR1-201ENST00000301364 ATOX1O00244 68 aa14.46□□□□□ -0.09
TSR1-201ENST00000301364 PRB1P04280 392 aa14.46□□□□□ -0.1
TSR1-201ENST00000301364 Q6YL49 198 aa14.46□□□□□ -0.1
TSR1-201ENST00000301364 C1orf43Q9BWL3 253 aa14.46□□□□□ -0.1
TSR1-201ENST00000301364 URB1-AS1Q96HZ7 61 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 LECT2O14960 151 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 TNRC6BQ9UPQ9 1833 aaKnown RBP14.45□□□□□ -0.1
TSR1-201ENST00000301364 FAM236AA0A1B0GUQ0 79 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 FAM236BA0A1B0GV22 79 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 CITED2Q99967 270 aaPredicted RBP14.45□□□□□ -0.1
TSR1-201ENST00000301364 IGKV2D-24A0A075B6R9 120 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 MRPS12O15235 138 aaKnown RBP14.45□□□□□ -0.1
TSR1-201ENST00000301364 PRORYQ9H606 182 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 SS18L2Q9UHA2 77 aa14.45□□□□□ -0.1
TSR1-201ENST00000301364 RNASE3P12724 160 aaKnown RBP14.44□□□□□ -0.1
TSR1-201ENST00000301364 CAMK2N2Q96S95 79 aa14.44□□□□□ -0.1
TSR1-201ENST00000301364 PTPN13Q12923 2485 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 CDKN2A-AS1Q9UH64 79 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 HIVEP2P31629 2446 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 PRO0255Q9UI72 69 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 PYGO1Q9Y3Y4 419 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 EML5Q05BV3 1969 aa14.43□□□□□ -0.1
TSR1-201ENST00000301364 PIEZO2Q9H5I5 2752 aa14.42□□□□□ -0.1
TSR1-201ENST00000301364 DEFB114Q30KQ6 69 aa14.42□□□□□ -0.1
TSR1-201ENST00000301364 LINC00467Q9BRT7 94 aa14.42□□□□□ -0.1
TSR1-201ENST00000301364 HIST2H2BDQ6DRA6 164 aa14.42□□□□□ -0.1
TSR1-201ENST00000301364 KLLNB2CW77 178 aa14.42□□□□□ -0.1
TSR1-201ENST00000301364 Q6ZTI0 123 aa14.41□□□□□ -0.1
TSR1-201ENST00000301364 TLN1Q9Y490 2541 aaKnown RBP14.41□□□□□ -0.1
TSR1-201ENST00000301364 PRR9Q5T870 116 aa14.41□□□□□ -0.1
TSR1-201ENST00000301364 ZMAT4Q9H898 229 aa14.41□□□□□ -0.1
TSR1-201ENST00000301364 LRRC75A-AS1Q8N1F1 130 aa14.41□□□□□ -0.1
TSR1-201ENST00000301364 CLPSL1A2RUU4 121 aa14.4□□□□□ -0.1
TSR1-201ENST00000301364 POLR2KP53803 58 aaKnown RBP14.4□□□□□ -0.1
TSR1-201ENST00000301364 C2CD3Q4AC94 2353 aa14.4□□□□□ -0.1
TSR1-201ENST00000301364 LINC00643Q86TS7 51 aa14.4□□□□□ -0.1
TSR1-201ENST00000301364 IGKV3D-7A0A0C4DH55 119 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 PSMB8P28062 276 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 TIRAPP58753 221 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 DNAJC9-AS1A6NH13 148 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 NDUFA1O15239 70 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 IGHV3-33P01772 117 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 TRBV30A0A0K0K1B3 111 aa14.39□□□□□ -0.11
TSR1-201ENST00000301364 INSL3P51460 131 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 A0A1B0GX51 115 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 H7C423 109 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 GAS8-AS1O95177 125 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 CFAP126Q5VTH2 177 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 NAV2Q8IVL1 2488 aa14.38□□□□□ -0.11
TSR1-201ENST00000301364 SPAG11BQ08648 103 aa14.37□□□□□ -0.11
TSR1-201ENST00000301364 TMEM256-PLSCR3K7ERE1 68 aa14.37□□□□□ -0.11
TSR1-201ENST00000301364 IGHV4-31P0DP07 118 aa14.37□□□□□ -0.11
TSR1-201ENST00000301364 COX8CQ7Z4L0 72 aa14.37□□□□□ -0.11
TSR1-201ENST00000301364 ESM1Q9NQ30 184 aa14.37□□□□□ -0.11
TSR1-201ENST00000301364 IGHV3-30P01768 117 aa14.36□□□□□ -0.11
TSR1-201ENST00000301364 IGHV3-30-5P0DP03 117 aa14.36□□□□□ -0.11
TSR1-201ENST00000301364 IGLV1-40P01703 118 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 IGF2RP11717 2491 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 FUSP35637 526 aaKnown RBP eCLIP14.35□□□□□ -0.11
TSR1-201ENST00000301364 TSHBP01222 138 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 MT-ATP8P03928 68 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 DEFB135Q30KP9 77 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 LINC00308Q8TCZ7 52 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 C9orf85Q96MD7 179 aa14.35□□□□□ -0.11
TSR1-201ENST00000301364 TRAV26-1A0A087WT03 109 aa14.34□□□□□ -0.11
TSR1-201ENST00000301364 TEX49A0A1B0GTD5 131 aa14.34□□□□□ -0.11
TSR1-201ENST00000301364 Q9HAA7 133 aa14.34□□□□□ -0.11
TSR1-201ENST00000301364 EXPH5Q8NEV8 1989 aa14.34□□□□□ -0.11
TSR1-201ENST00000301364 TRIAP1O43715 76 aa14.33□□□□□ -0.11
TSR1-201ENST00000301364 ETDCA0A1B0GVM5 59 aa14.33□□□□□ -0.12
TSR1-201ENST00000301364 TIMM17BO60830 172 aa14.33□□□□□ -0.12
TSR1-201ENST00000301364 NCR3O14931 201 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 CRYGDP07320 174 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 RBM3P98179 157 aaKnown RBP14.32□□□□□ -0.12
TSR1-201ENST00000301364 C10orf99Q6UWK7 81 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 PSMG3-AS1Q96PY0 264 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 SMIM20Q8N5G0 67 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 DEFB105AQ8NG35 78 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 DCANP1Q8TF63 244 aa14.32□□□□□ -0.12
TSR1-201ENST00000301364 KLK12Q9UKR0 248 aa14.31□□□□□ -0.12
TSR1-201ENST00000301364 hADV29S1A0JD25 119 aa14.31□□□□□ -0.12
TSR1-201ENST00000301364 PDE6GP18545 87 aa14.31□□□□□ -0.12
TSR1-201ENST00000301364 DIRC1Q969H9 104 aa14.31□□□□□ -0.12
TSR1-201ENST00000301364 SONP18583 2426 aaKnown RBP14.31□□□□□ -0.12
TSR1-201ENST00000301364 ARHGAP32A7KAX9 2087 aa14.3□□□□□ -0.12
TSR1-201ENST00000301364 SORL1Q92673 2214 aa14.3□□□□□ -0.12
TSR1-201ENST00000301364 IBA57-AS1B1ANH7 110 aa14.3□□□□□ -0.12
TSR1-201ENST00000301364 SMIM9A6NGZ8 99 aa14.29□□□□□ -0.12
TSR1-201ENST00000301364 PROK1P58294 105 aa14.29□□□□□ -0.12
TSR1-201ENST00000301364 RPL18AQ02543 176 aaKnown RBP14.29□□□□□ -0.12
TSR1-201ENST00000301364 NCOR2Q9Y618 2525 aa14.29□□□□□ -0.12
TSR1-201ENST00000301364 TRBV6-4A0A1B0GX49 114 aa14.29□□□□□ -0.12
TSR1-201ENST00000301364 NDUFV3P56181 108 aaKnown RBP14.29□□□□□ -0.12
TSR1-201ENST00000301364 MYO9AB2RTY4 2548 aa14.29□□□□□ -0.12
TSR1-201ENST00000301364 PIEZO1Q92508 2521 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms