RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Trav7d-4Q5R1H9 113 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Tbr1Q64336 681 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Trpt1Q8K3A2 249 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Olfr484Q8VFD3 321 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Olfr1441Q8VFV3 318 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Srd5a2Q99N99 254 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Tmem219Q9D123 240 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Fam213bQ9DB60 201 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Gdf15Q9Z0J7 303 aa13.17□□□□□ -0.3
Ret-202ENSMUST00000088790 Lnp1A0A1B0GSK3 178 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Gm10130F6ZHM5 101 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Gm21913J3KML9 361 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Gm21776J3QPJ5 361 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Dkk1O54908 272 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Hist1h2bmP10854 126 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Hist1h2bhQ64478 126 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Hist2h2bbQ64525 126 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Vsig8Q6P3A4 417 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Olfr1336Q8VGH5 314 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Rspo1Q9Z132 265 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 LfngO09010 378 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Zfp72Q0VFY0 435 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Gm14214V9GX35 225 aa13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Rps20P60867 119 aaKnown RBP13.16□□□□□ -0.3
Ret-202ENSMUST00000088790 Fam240aJ3QNP9 97 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Acrv1P50289 261 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Cited1P97769 203 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Znf260Q62513 407 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Zfp677Q6PEP4 634 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Rtn4rl2Q7M6Z0 420 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Gm10190Q8BSD7 107 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Q8CF25 301 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Pip4p2Q9CZX7 257 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Igkv13-84A0A140T8N3 115 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 1700015F17RikD3YUK8 150 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 TymsP07607 307 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Egr1P08046 533 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 PpoxP51175 477 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Otx1P80205 355 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Spint3Q3UW09 88 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Trappc1Q5NCF2 145 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 SnrpcQ62241 159 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 PgpQ8CHP8 321 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Ighv5-16A0A0B4J1P4 117 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 D830044I16RikA0A1D5RM53 117 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Tmem139E9PX92 214 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Rnf212F6TQD1 307 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Cxcl13O55038 109 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Fgf4P11403 202 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 P18526 117 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 EpopQ7TNS8 369 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Slamf7Q8BHK6 333 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Ighv1-36A0A0A6YXT2 117 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Igkv12-89A0A0G2JGW8 112 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 P01723 117 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Gfra1P97785 468 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Trdv2-2Q5R1A4 116 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 TncQ80YX1 2110 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Tmem160Q9D938 188 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 Fxyd1Q9Z239 92 aa13.15□□□□□ -0.3
Ret-202ENSMUST00000088790 1700084M14RikB1AT01 78 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 1700067P10RikG3X8U2 183 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Iglc2P01844 104 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 GrnP28798 589 aaKnown RBP13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Atp6v0cP63082 155 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Trbv1A0A0B4J1G7 116 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Gm12830F6XVH0 157 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Nat8f4G5E8L3 226 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Defa9P50707 93 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Olfr1535Q7TQU0 326 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 4930474N05RikQ8BVR5 218 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Adamts17E9Q4D1 1122 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Tcl1b2P56841 117 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Olfr553Q7TRS6 326 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Prok2Q9QXU7 128 aa13.14□□□□□ -0.31
Ret-202ENSMUST00000088790 Trav7n-5A0A075B604 112 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 P01660 111 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 C330021F23RikQ8C7T0 141 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 LtbP41155 306 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Ube2d2bQ6ZWY6 147 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Sh3bgrl3Q91VW3 93 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Ighv1-37A0A0A6YW32 117 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Gm17727E9Q4V7 109 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Zfp27P10077 819 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Morn2Q6UL01 79 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Spry4Q9WTP2 300 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 MyofQ69ZN7 2048 aaKnown RBP13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Ighv1-67A0A0G2JFN9 117 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Gm20825J3QM67 227 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Ssty2Q149W4 227 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Gm21394Q497R7 227 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Gm20854Q62461 227 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Cdcp2Q8BQH6 427 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Tmem50aQ9CXL1 157 aa13.13□□□□□ -0.31
Ret-202ENSMUST00000088790 Wisp3D3Z5L9 354 aa13.12□□□□□ -0.31
Ret-202ENSMUST00000088790 Wnt5bP22726 359 aa13.12□□□□□ -0.31
Ret-202ENSMUST00000088790 CampP51437 172 aa13.12□□□□□ -0.31
Ret-202ENSMUST00000088790 Bud31Q6PGH1 103 aa13.12□□□□□ -0.31
Ret-202ENSMUST00000088790 AmtnQ9D3J8 213 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 67.1 ms