Protein–RNA interactions for Protein: A0A0G2JFN9

Ighv1-67, Immunoglobulin heavy variable V1-67 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-67A0A0G2JFN9 Gm25239-201ENSMUST00000174915 86 ntBASIC28.25■■■□□ 2.11
Ighv1-67A0A0G2JFN9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ighv1-67A0A0G2JFN9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ighv1-67A0A0G2JFN9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ighv1-67A0A0G2JFN9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ighv1-67A0A0G2JFN9 Psd-208ENSMUST00000224556 2034 ntBASIC26.19■■□□□ 1.78
Ighv1-67A0A0G2JFN9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ighv1-67A0A0G2JFN9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ighv1-67A0A0G2JFN9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ighv1-67A0A0G2JFN9 Gm15042-201ENSMUST00000120212 883 ntBASIC24.98■■□□□ 1.59
Ighv1-67A0A0G2JFN9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ighv1-67A0A0G2JFN9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ighv1-67A0A0G2JFN9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv1-67A0A0G2JFN9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv1-67A0A0G2JFN9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ighv1-67A0A0G2JFN9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ighv1-67A0A0G2JFN9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ighv1-67A0A0G2JFN9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ighv1-67A0A0G2JFN9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ighv1-67A0A0G2JFN9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ighv1-67A0A0G2JFN9 Gm15045-201ENSMUST00000117359 883 ntBASIC24.4■■□□□ 1.5
Ighv1-67A0A0G2JFN9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ighv1-67A0A0G2JFN9 Gm24109-201ENSMUST00000175489 103 ntBASIC24.33■■□□□ 1.49
Ighv1-67A0A0G2JFN9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ighv1-67A0A0G2JFN9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ighv1-67A0A0G2JFN9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ighv1-67A0A0G2JFN9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.89■■□□□ 1.42
Ighv1-67A0A0G2JFN9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ighv1-67A0A0G2JFN9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv1-67A0A0G2JFN9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv1-67A0A0G2JFN9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv1-67A0A0G2JFN9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv1-67A0A0G2JFN9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ighv1-67A0A0G2JFN9 Gm23366-201ENSMUST00000175022 89 ntBASIC23.7■■□□□ 1.38
Ighv1-67A0A0G2JFN9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv1-67A0A0G2JFN9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.65■■□□□ 1.38
Ighv1-67A0A0G2JFN9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.64■■□□□ 1.38
Ighv1-67A0A0G2JFN9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.64■■□□□ 1.38
Ighv1-67A0A0G2JFN9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ighv1-67A0A0G2JFN9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv1-67A0A0G2JFN9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv1-67A0A0G2JFN9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-67A0A0G2JFN9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv1-67A0A0G2JFN9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ighv1-67A0A0G2JFN9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-67A0A0G2JFN9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-67A0A0G2JFN9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ighv1-67A0A0G2JFN9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-67A0A0G2JFN9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-67A0A0G2JFN9 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.17■■□□□ 1.3
Ighv1-67A0A0G2JFN9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-67A0A0G2JFN9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ighv1-67A0A0G2JFN9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.02■■□□□ 1.28
Ighv1-67A0A0G2JFN9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ighv1-67A0A0G2JFN9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ighv1-67A0A0G2JFN9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.89■■□□□ 1.26
Ighv1-67A0A0G2JFN9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.89■■□□□ 1.25
Ighv1-67A0A0G2JFN9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ighv1-67A0A0G2JFN9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ighv1-67A0A0G2JFN9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ighv1-67A0A0G2JFN9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Ighv1-67A0A0G2JFN9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-67A0A0G2JFN9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.56■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.53■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv1-67A0A0G2JFN9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.47■■□□□ 1.19
Ighv1-67A0A0G2JFN9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ighv1-67A0A0G2JFN9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ighv1-67A0A0G2JFN9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-67A0A0G2JFN9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.42■■□□□ 1.18
Ighv1-67A0A0G2JFN9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.4■■□□□ 1.18
Ighv1-67A0A0G2JFN9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ighv1-67A0A0G2JFN9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-67A0A0G2JFN9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-67A0A0G2JFN9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Ighv1-67A0A0G2JFN9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ighv1-67A0A0G2JFN9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ighv1-67A0A0G2JFN9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-67A0A0G2JFN9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv1-67A0A0G2JFN9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.27■■□□□ 1.16
Ighv1-67A0A0G2JFN9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-67A0A0G2JFN9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-67A0A0G2JFN9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv1-67A0A0G2JFN9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv1-67A0A0G2JFN9 Gm25238-201ENSMUST00000174914 89 ntBASIC22.18■■□□□ 1.14
Ighv1-67A0A0G2JFN9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv1-67A0A0G2JFN9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-67A0A0G2JFN9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms