RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 S100A5P33763 92 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 RPL22P35268 128 aaKnown RBP0.18□□□□□ -2.38
SKP1-203ENST00000517625 FXYD3Q14802 87 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 ZGRF1Q86YA3 2104 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 ARL17AQ8IVW1 177 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 OR51A4Q8NGJ6 313 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 LINC00208Q96KT6 92 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 CBLN4Q9NTU7 201 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 FKBP11Q9NYL4 201 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 DNAH9Q9NYC9 4486 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 KIAA0100Q14667 2235 aaKnown RBP0.18□□□□□ -2.38
SKP1-203ENST00000517625 TNRC6CQ9HCJ0 1690 aaKnown RBP0.18□□□□□ -2.38
SKP1-203ENST00000517625 ANK3Q12955 4377 aaKnown RBP0.17□□□□□ -2.38
SKP1-203ENST00000517625 PTPRDP23468 1912 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 LOC107984640A0A0U1RRK4 108 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 TPST1O60507 370 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 EDF1O60869 148 aaKnown RBP0.17□□□□□ -2.38
SKP1-203ENST00000517625 HBDP02042 147 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 RGPD1P0DJD0 1748 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 FAM135BQ49AJ0 1406 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 IDO2Q6ZQW0 420 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 TEX29Q8N6K0 151 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 C5orf56Q8N8D9 126 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 UGGT1Q9NYU2 1555 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 CROCC2H7BZ55 1655 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 DCAF1Q9Y4B6 1507 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 MYO7AQ13402 2215 aa0.17□□□□□ -2.38
SKP1-203ENST00000517625 SHROOM2Q13796 1616 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 USP32Q8NFA0 1604 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 NRXN3Q9Y4C0 1643 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 LRRC37A2A6NM11 1700 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 ADGRB1O14514 1584 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 FAT1Q14517 4588 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 C10orf71Q711Q0 1435 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 A0A0G2JMM0 328 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 PNMA8CA0A1B0GUJ8 204 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 UQCRQO14949 82 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 LY6G6CO95867 125 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 IFNA21P01568 189 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 RPS28P62857 69 aaKnown RBP0.16□□□□□ -2.38
SKP1-203ENST00000517625 KLKP1Q107X0 134 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 TMEM128Q5BJH2 165 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 LYPD5Q6UWN5 251 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 HRCT1Q6UXD1 115 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 DDA1Q9BW61 102 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 MYH2Q9UKX2 1941 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 TRRAPQ9Y4A5 3859 aa0.16□□□□□ -2.38
SKP1-203ENST00000517625 RNF17Q9BXT8 1623 aaKnown RBP0.16□□□□□ -2.38
SKP1-203ENST00000517625 DNAH5Q8TE73 4624 aa0.15□□□□□ -2.38
SKP1-203ENST00000517625 ZNF831Q5JPB2 1677 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 CTTNBP2Q8WZ74 1663 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 A0A096LNT2 108 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 LOC101927531A0A1B0GV80 90 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 FABP1P07148 127 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 SDC4P31431 198 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 CKS2P33552 79 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 ZNF56Q15929 161 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 CCDC115Q96NT0 180 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 ATG5Q9H1Y0 275 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 COMMD3Q9UBI1 195 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 TRAPPC2LQ9UL33 140 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 GOLGA3Q08378 1498 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 ABCA1O95477 2261 aa0.15□□□□□ -2.39
SKP1-203ENST00000517625 CPS1P31327 1500 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 TNS1Q9HBL0 1735 aaKnown RBP0.14□□□□□ -2.39
SKP1-203ENST00000517625 IGHV1-24A0A0C4DH33 117 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 MCRIP1C9JLW8 97 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 RPL7P18124 248 aaKnown RBP0.14□□□□□ -2.39
SKP1-203ENST00000517625 SAMD13Q5VXD3 122 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 SKA2Q8WVK7 121 aaPredicted RBP0.14□□□□□ -2.39
SKP1-203ENST00000517625 TMEM14BQ9NUH8 114 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 MED23Q9ULK4 1368 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 NRXN1Q9ULB1 1477 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 TNCP24821 2201 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 USP54Q70EL1 1684 aa0.14□□□□□ -2.39
SKP1-203ENST00000517625 KIAA1549LQ6ZVL6 1849 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 NEFHP12036 1026 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 TMEM35BQ8NCS4 154 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 OR4S1Q8NGB4 309 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 OTOSQ8NHW6 89 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 PPP1R1CQ8WVI7 109 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 VPS25Q9BRG1 176 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 ANKRD26Q9UPS8 1709 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 PTPRGP23470 1445 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 PPIP5K1Q6PFW1 1433 aa0.13□□□□□ -2.39
SKP1-203ENST00000517625 LPAP08519 4548 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 TRAV2A0A0B4J234 112 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 LCE6AA0A183 80 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 TEX49A0A1B0GTD5 131 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 M0QZK8 103 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 CDC42EP2O14613 210 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 PSPHP78330 225 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 BRK1Q8WUW1 75 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 PPDPFLQ8WWR9 84 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 LINC00846Q9NV44 126 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 SPANXCQ9NY87 97 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 EEA1Q15075 1411 aa0.12□□□□□ -2.39
SKP1-203ENST00000517625 LOC285556D6RIA3 1793 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms