RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 UBE2G1P62253 170 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 ZNF818PQ6ZRF7 136 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 COMMD6Q7Z4G1 85 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 SBSPONQ8IVN8 264 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 C9orf62Q8N4C0 152 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 C15orf53Q8NAA6 179 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 C10orf105Q8TEF2 133 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 SNHG12Q9BXW3 62 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 CPSF1Q10570 1443 aaKnown RBP1.45□□□□□ -2.18
CLK1-214ENST00000496205 NSD3Q9BZ95 1437 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 ABCA8O94911 1581 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 CDC42BPAQ5VT25 1732 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 CITO14578 2027 aa1.45□□□□□ -2.18
CLK1-214ENST00000496205 TNRC6BQ9UPQ9 1833 aaKnown RBP1.45□□□□□ -2.18
CLK1-214ENST00000496205 ABCA9Q8IUA7 1624 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 SPHKAPQ2M3C7 1700 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 IGKV2-40A0A087WW87 121 aaPredicted RBP1.44□□□□□ -2.18
CLK1-214ENST00000496205 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 TRAV12-3A0A0B4J271 114 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 MPC2O95563 127 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 IGKV2D-40P01614 121 aaPredicted RBP1.44□□□□□ -2.18
CLK1-214ENST00000496205 LINC00032P0C843 101 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 IFI27L1Q96BM0 104 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 AMELYQ99218 206 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 CYP4F30PQ9H0H9 118 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 PRO1933Q9H354 126 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 KDM5AP29375 1690 aaKnown RBP1.44□□□□□ -2.18
CLK1-214ENST00000496205 MYO18AQ92614 2054 aaKnown RBP1.44□□□□□ -2.18
CLK1-214ENST00000496205 MAP3K4Q9Y6R4 1608 aa1.44□□□□□ -2.18
CLK1-214ENST00000496205 TEX14Q8IWB6 1497 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 RICTORQ6R327 1708 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 ANKRD26Q9UPS8 1709 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 BAHCC1Q9P281 2608 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 C10orf71Q711Q0 1435 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 CROCC2H7BZ55 1655 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 TRAV13-2A0A0B4J235 113 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 H3BQF6 201 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 INSL4Q14641 139 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 SPRNQ5BIV9 151 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 CYP2G1PQ6ZSU1 146 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 DSCR8Q96T75 97 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 DPH3P1Q9H4G8 78 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 ABCC2Q92887 1545 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 CHD3Q12873 2000 aaKnown RBP1.43□□□□□ -2.18
CLK1-214ENST00000496205 RAPGEF6Q8TEU7 1601 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 EXPH5Q8NEV8 1989 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 KIAA1551Q9HCM1 1747 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 MYOFQ9NZM1 2061 aa1.43□□□□□ -2.18
CLK1-214ENST00000496205 MAST1Q9Y2H9 1570 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 ITSN2Q9NZM3 1697 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 RBBP6Q7Z6E9 1792 aaKnown RBP1.42□□□□□ -2.18
CLK1-214ENST00000496205 ARHGAP5Q13017 1502 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 DEPDC5O75140 1603 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 PREX2Q70Z35 1606 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 SIX6O95475 246 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 RPL37AP61513 92 aaKnown RBP1.42□□□□□ -2.18
CLK1-214ENST00000496205 RBM3P98179 157 aaKnown RBP1.42□□□□□ -2.18
CLK1-214ENST00000496205 S100A7L2Q5SY68 101 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 XAF1Q6GPH4 301 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 DEFB119Q8N690 84 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 MYOZ3Q8TDC0 251 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 DPY30Q9C005 99 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 Q9H521 79 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 MYO5CQ9NQX4 1742 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 NWD2Q9ULI1 1742 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 DOCK10Q96BY6 2186 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 GOLGA3Q08378 1498 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 CCDC18Q5T9S5 1454 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 FYCO1Q9BQS8 1478 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 ARHGAP35Q9NRY4 1499 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 DLEC1Q9Y238 1755 aa1.42□□□□□ -2.18
CLK1-214ENST00000496205 TNRC6AQ8NDV7 1962 aaKnown RBP1.41□□□□□ -2.18
CLK1-214ENST00000496205 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
CLK1-214ENST00000496205 ZMYM4Q5VZL5 1548 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 EIF2AK4Q9P2K8 1649 aaKnown RBP1.41□□□□□ -2.18
CLK1-214ENST00000496205 PRB4P10163 310 aaPredicted RBP1.41□□□□□ -2.18
CLK1-214ENST00000496205 UBE2D1P51668 147 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 PXDNQ92626 1479 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 PLXNC1O60486 1568 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 ARHGEF5Q12774 1597 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 CFAP74Q9C0B2 1584 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 DIP2BQ9P265 1576 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 MROH2AA6NES4 1674 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 MUC22E2RYF6 1773 aaPredicted RBP1.41□□□□□ -2.18
CLK1-214ENST00000496205 ARFGEF3Q5TH69 2177 aa1.41□□□□□ -2.18
CLK1-214ENST00000496205 CASKIN1Q8WXD9 1431 aa1.4□□□□□ -2.18
CLK1-214ENST00000496205 MAGI3Q5TCQ9 1506 aa1.4□□□□□ -2.18
CLK1-214ENST00000496205 POLR1AO95602 1720 aaPredicted RBP1.4□□□□□ -2.18
CLK1-214ENST00000496205 SUPT6HQ7KZ85 1726 aaKnown RBP1.4□□□□□ -2.18
CLK1-214ENST00000496205 TNS1Q9HBL0 1735 aaKnown RBP1.4□□□□□ -2.18
CLK1-214ENST00000496205 UNC13CQ8NB66 2214 aa1.4□□□□□ -2.18
CLK1-214ENST00000496205 ZC3H13Q5T200 1668 aaKnown RBP1.4□□□□□ -2.19
CLK1-214ENST00000496205 GCC2Q8IWJ2 1684 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 ROBO1Q9Y6N7 1651 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 TIAM1Q13009 1591 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 MAGI2Q86UL8 1455 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 TRBV7-1A0A0A6YYK4 115 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms