RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 ZNF818PQ6ZRF7 136 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PATE1Q8WXA2 126 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 FAM167A-AS1Q96KT0 104 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PRO0461Q9UI25 63 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NUMA1Q14980 2115 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SEC16AO15027 2179 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SLIT3O75094 1523 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KDM6BO15054 1643 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PEAK1Q9H792 1746 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ADAMTS9Q9P2N4 1935 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRBV7-3A0A075B6L6 115 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRAV23DV6A0A075B6W5 121 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRBV6-8A0A0A6YYG3 113 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NUPR2A6NF83 97 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MRPL36Q9P0J6 103 aaKnown RBP3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NCOA2Q15596 1464 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MAGI3Q5TCQ9 1506 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UGGT2Q9NYU1 1516 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MAP3K4Q9Y6R4 1608 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYH4Q9Y623 1939 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRAV22A0A0B4J277 110 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 H3BUT2 72 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UNC13BO14795 1591 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LTN1O94822 1766 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CDK13Q14004 1512 aaKnown RBP3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 Q5VV11 94 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 Q8N6K4 173 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 BPESC1Q9GZL8 116 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 HEATR1Q9H583 2144 aaKnown RBP3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LTBP2Q14767 1821 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CLTCQ00610 1675 aaKnown RBP3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KANTRA0A1W2PQU2 76 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A8MU10 97 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SPATA45Q537H7 98 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 HEPN1Q6WQI6 88 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 VMO1Q7Z5L0 202 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYOFQ9NZM1 2061 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PPRC1Q5VV67 1664 aaKnown RBP3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ABCA8O94911 1581 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MED13Q9UHV7 2174 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MPDZO75970 2070 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 IGKV3-7A0A075B6H7 116 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A0A0J9YY99 117 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 IQGAP3Q86VI3 1631 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYO3AQ8NEV4 1616 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ZFHX2Q9C0A1 2572 aaPredicted RBP3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 DOCK2Q92608 1830 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 EFNA4P52798 201 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 EDDM3BP56851 147 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SNRPFP62306 86 aaKnown RBP3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 FAM223AQ8IWN6 122 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LINC01600Q96MT4 127 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 COL4A6Q14031 1691 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CFAP74Q9C0B2 1584 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PLXNA1Q9UIW2 1896 aa3.03□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 F2Z2F3 143 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 BCE1O60756 84 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 HMGN3Q15651 99 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SFTA2Q6UW10 78 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 MED12LQ86YW9 2145 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 TOP2BQ02880 1626 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 MROH1Q8NDA8 1641 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZGRF1Q86YA3 2104 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 CLPSL1A2RUU4 121 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 NRXN1Q9ULB1 1477 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 PTPN23Q9H3S7 1636 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 INO80Q9ULG1 1556 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KIAA0100Q14667 2235 aaKnown RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 UBR1Q8IWV7 1749 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 A0A1W2PNN7 141 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGHV3-30P01768 117 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 COX6CP09669 75 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGHV3-30-5P0DP03 117 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SMIM11AP58511 58 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KRTAP10-3P60369 221 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 BLMP54132 1417 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 COL16A1Q07092 1604 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZNF142P52746 1687 aaPredicted RBP2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGKV2-28A0A075B6P5 120 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 PPYP01298 95 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGKV2D-28P01615 120 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZNF56Q15929 161 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms