RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 SMIM31A0A1B0GVY4 71 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 CRYM-AS1A6NIL9 109 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 M0R2Z0 102 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 PMP2P02689 132 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 YPEL3P61236 119 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 SUPT4H1P63272 117 aaKnown RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 EIF4EBP1Q13541 118 aaPredicted RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 UPK3BQ9BT76 320 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 TMEM70Q9BUB7 260 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.87
CCL20-201ENST00000358813 COPZ2Q9P299 210 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 SSR3Q9UNL2 185 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 LY96Q9Y6Y9 160 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
CCL20-201ENST00000358813 PKHD1P08F94 4074 aa3.34□□□□□ -1.88
CCL20-201ENST00000358813 TRAV5A0A0B4J249 113 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 LINC00862A6NCI5 91 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 A8MU10 97 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 SNRPGP15A8MWD9 76 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ETV6P41212 452 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 LINC00313P59037 77 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 HAMPP81172 84 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ACOT6Q3I5F7 207 aaPredicted RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 C1orf194Q5T5A4 169 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 GDF5OSQ5U4N7 250 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 SLC25A34Q6PIV7 304 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 TMEM91Q6ZNR0 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 BAP18Q8IXM2 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 AP3S1Q92572 193 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 RMI2Q96E14 147 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 S100A16Q96FQ6 103 aaKnown RBP3.33□□□□□ -1.88
CCL20-201ENST00000358813 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 DPH3P1Q9H4G8 78 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 ICOSQ9Y6W8 199 aa3.33□□□□□ -1.88
CCL20-201ENST00000358813 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TRAV12-2A0A075B6T6 113 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 A0A087WTM6 91 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 A0A0J9YX75 114 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 CFDP00746 253 aaPredicted RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 IGLC1P0CG04 106 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 DNAH10OSP0CZ25 163 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 RNASE2P10153 161 aaKnown RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 FUSP35637 526 aaKnown RBP eCLIP3.32□□□□□ -1.88
CCL20-201ENST00000358813 RPL5P46777 297 aaKnown RBP3.32□□□□□ -1.88
CCL20-201ENST00000358813 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 GPR146Q96CH1 333 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TMEM147Q9BVK8 224 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 TMEM56-RWDD3S4R434 201 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
CCL20-201ENST00000358813 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
CCL20-201ENST00000358813 HERC1Q15751 4861 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 C3orf85A0A1B0GTC6 90 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 TRDV1A0A1B0GX56 115 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 A8MWP4 228 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 H3BNG1 76 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 H7BYZ3 331 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 K7EP13 123 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 M0R381 172 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 SRIP30626 198 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 PIGPP57054 158 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 DEFB1P60022 68 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 ESRGQ1W209 222 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 SH2D6Q7Z4S9 175 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 TMED4Q7Z7H5 227 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 FXYD6Q9H0Q3 95 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 NDUFB11Q9NX14 153 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 LSM2Q9Y333 95 aaKnown RBP3.31□□□□□ -1.88
CCL20-201ENST00000358813 PHLDA3Q9Y5J5 127 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 PXMP4Q9Y6I8 212 aa3.31□□□□□ -1.88
CCL20-201ENST00000358813 A0A096LPF7 62 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 TRGV1A0A0A0MS02 117 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 PIGBOS1A0A0B4J2F0 54 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 RPL7P18124 248 aaKnown RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 G0S2P27469 103 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 KRTAP10-1P60331 282 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 SCGB2B2Q4G0G5 96 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 RNASE10Q5GAN6 216 aaKnown RBP3.3□□□□□ -1.88
CCL20-201ENST00000358813 ZNF680Q8NEM1 530 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 PRRT1Q99946 306 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 TXNDC17Q9BRA2 123 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 U3KQ87 197 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 HSPG2P98160 4391 aa3.3□□□□□ -1.88
CCL20-201ENST00000358813 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 TRGV4A0A0C4DH28 118 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 A6NED7 52 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 TMEM238C9JI98 176 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 APOMO95445 188 aa3.29□□□□□ -1.88
CCL20-201ENST00000358813 CRYGDP07320 174 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms