RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 EMP1P54849 157 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 CFHR3Q02985 330 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 SH2D6Q7Z4S9 175 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.13□□□□□ -1.273e-7■■■■□ 23.4
HNRNPU-216ENST00000638716 TMEM238C9JI98 176 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 F5H697 171 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 K7EMT4 169 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 VCYO14598 125 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 RPL39P62891 51 aaKnown RBP7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 CCL19Q99731 98 aa7.13□□□□□ -1.27
HNRNPU-216ENST00000638716 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 PMVKQ15126 192 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 PGPEP1Q9NXJ5 209 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 PRO0461Q9UI25 63 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 IGHV4-30-2A0A087WSY4 118 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
HNRNPU-216ENST00000638716 SDHAF1A6NFY7 115 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 NDUFS8O00217 210 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 MRPL16Q9NX20 251 aaKnown RBP7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 COL12A1Q99715 3063 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 SORL1Q92673 2214 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 LGALS9O00182 355 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 AVPP01185 164 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 MSMBP08118 114 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 UBE2D1P51668 147 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 HERVK_113P61574 105 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 SPAG8Q99932 426 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 TSSC4Q9Y5U2 329 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-216ENST00000638716 A0A0J9YY99 117 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 TRBV27A0A0K0K1C4 114 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 J3QR89 54 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 ZNF688P0C7X2 276 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 ATP5J2P56134 94 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 SAMD13Q5VXD3 122 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 CSPG4Q6UVK1 2322 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 C9orf85Q96MD7 179 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 BBC3Q96PG8 261 aaPredicted RBP7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 PRORYQ9H606 182 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 TRAV12-2A0A075B6T6 113 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 TRBV6-5A0A0K0K1A5 114 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 IGKV3-20P01619 116 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 PSMB8P28062 276 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
HNRNPU-216ENST00000638716 GAGE12HA6NDE8 117 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 TSPAN13O95857 204 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 ZNF876PQ49A33 203 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 GTSF1LQ9H1H1 148 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 ZNF256Q9Y2P7 627 aaPredicted RBP7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 APOMO95445 188 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 PLA2G2AP14555 144 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 AZU1P20160 251 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 TSPEAR-AS2P59090 65 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 C10orf99Q6UWK7 81 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 SIGMAR1Q99720 223 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 SPXQ9BT56 116 aa7.09□□□□□ -1.27
HNRNPU-216ENST00000638716 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.28
HNRNPU-216ENST00000638716 A0A0J9YX75 114 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 ZNF56Q15929 161 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 Q8N1Y9 231 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 DLX4Q92988 240 aaPredicted RBP7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 DOPEY2Q9Y3R5 2298 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 M0QY20 66 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 INSL3P51460 131 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 SYT8Q8NBV8 401 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 ZNF580Q9UK33 172 aa7.08□□□□□ -1.28
HNRNPU-216ENST00000638716 ZFYVE26Q68DK2 2539 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 LOC107984156A0A0G2JMH3 177 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 PSMB2P49721 201 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 CFAP126Q5VTH2 177 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 NDUFA11Q86Y39 141 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 ARL17AQ8IVW1 177 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 OPRPNQ99935 248 aaPredicted RBP7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SPATA25Q9BR10 227 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 K7EQG2 157 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 UBE2D3P61077 147 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 UBE2D2P62837 147 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SPINK13Q1W4C9 94 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SLC25A29Q8N8R3 303 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 SPG11Q96JI7 2443 aa7.07□□□□□ -1.28
HNRNPU-216ENST00000638716 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
HNRNPU-216ENST00000638716 IGHV1OR15-1A0A075B7D0 117 aa7.06□□□□□ -1.28
HNRNPU-216ENST00000638716 B4DSR2 109 aa7.06□□□□□ -1.28
HNRNPU-216ENST00000638716 IGHV4-59P01825 116 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms