RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 MAJINQ3KP22 176 aa10.46□□□□□ -0.74
RABGGTA-209ENST00000559551 Q8N1Y9 231 aa10.46□□□□□ -0.74
RABGGTA-209ENST00000559551 STHQ8IWL8 128 aa10.45□□□□□ -0.74
RABGGTA-209ENST00000559551 PRM2P04554 102 aa10.45□□□□□ -0.74
RABGGTA-209ENST00000559551 CMC4P56277 68 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-209ENST00000559551 TPPP3Q9BW30 176 aa10.45□□□□□ -0.74
RABGGTA-209ENST00000559551 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
RABGGTA-209ENST00000559551 VAMP3Q15836 100 aa10.44□□□□□ -0.74
RABGGTA-209ENST00000559551 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
RABGGTA-209ENST00000559551 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-209ENST00000559551 PPBPP02775 128 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 MSRB1Q9NZV6 116 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 XCL2Q9UBD3 114 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 CAMPP49913 170 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 CNFNQ9BYD5 112 aa10.43□□□□□ -0.74
RABGGTA-209ENST00000559551 A0A1B0GUT8 65 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 HSBP1L1C9JCN9 74 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 H3BVH4 76 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 SNAI2O43623 268 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 HBBP68871 147 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 Q6ZVH6 145 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 C1orf158Q8N1D5 194 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
RABGGTA-209ENST00000559551 NBEAL1Q6ZS30 2694 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 OR5AL1P0C617 328 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 FAM159AQ6UWV7 190 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
RABGGTA-209ENST00000559551 SYS1-DBNDD2H3BUS1 97 aa10.4□□□□□ -0.74
RABGGTA-209ENST00000559551 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
RABGGTA-209ENST00000559551 NACAE9PAV3 2078 aa10.4□□□□□ -0.74
RABGGTA-209ENST00000559551 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.75
RABGGTA-209ENST00000559551 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.75
RABGGTA-209ENST00000559551 GATD1Q8NB37 220 aa10.4□□□□□ -0.75
RABGGTA-209ENST00000559551 CSNK1G2-AS1Q8NCQ2 148 aa10.4□□□□□ -0.75
RABGGTA-209ENST00000559551 INSP01308 110 aa10.39□□□□□ -0.75
RABGGTA-209ENST00000559551 ASIPP42127 132 aa10.39□□□□□ -0.75
RABGGTA-209ENST00000559551 EGFEM1PQ0D2K5 195 aa10.39□□□□□ -0.75
RABGGTA-209ENST00000559551 BVES-AS1Q5T3Y7 98 aa10.39□□□□□ -0.75
RABGGTA-209ENST00000559551 G3V4G9 280 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 TAX1BP3O14907 124 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 LEPROTL1O95214 131 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 RNF151Q2KHN1 245 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 TIMM8BQ9Y5J9 83 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 IGHV1-24A0A0C4DH33 117 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 RIGQ13278 110 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 C9orf85Q96MD7 179 aa10.38□□□□□ -0.75
RABGGTA-209ENST00000559551 IGHV4-4A0A075B6R2 117 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 NUDT3O95989 172 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 PMCHL2Q9BQD1 86 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 MAP1LC3CQ9BXW4 147 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 AZU1P20160 251 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 TWIST1Q15672 202 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
RABGGTA-209ENST00000559551 HTN1P15515 57 aa10.36□□□□□ -0.75
RABGGTA-209ENST00000559551 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-209ENST00000559551 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
RABGGTA-209ENST00000559551 LINC01587Q99440 93 aa10.36□□□□□ -0.75
RABGGTA-209ENST00000559551 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
RABGGTA-209ENST00000559551 CBY3A6NI87 242 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 NXPH4O95158 308 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 C11orf72Q8NBR9 251 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 VPS25Q9BRG1 176 aa10.35□□□□□ -0.75
RABGGTA-209ENST00000559551 IGHV3OR16-12A0A075B7B8 117 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 LOC102724200A0A096LPH7 203 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 A0A1B0GW15 77 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 M0R381 172 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 EVI2AP22794 236 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 RNF185Q96GF1 192 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 CSTL1Q9H114 145 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 JPT2Q9H910 190 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 PHLDA3Q9Y5J5 127 aa10.34□□□□□ -0.75
RABGGTA-209ENST00000559551 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 K7ERU9 68 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 IGHV4-30-4P0DP06 118 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 CACNG7P62955 275 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
RABGGTA-209ENST00000559551 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms