RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PCP2Q8IVA1 136 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 IGKV1D-37A0A075B6S9 117 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 TRAV25A0A0B4J276 109 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 IGHV3-16A0A0C4DH30 117 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 HERV-K104P63124 156 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 CENPFP49454 3210 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 IGHG2P01859 326 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 C16orf54Q6UWD8 224 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
PHRF1-206ENST00000534320 WFDC2Q14508 124 aa13.33□□□□□ -0.27
PHRF1-206ENST00000534320 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
PHRF1-206ENST00000534320 GNRH2O43555 120 aa13.33□□□□□ -0.28
PHRF1-206ENST00000534320 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
PHRF1-206ENST00000534320 ODF3BA8MYP8 253 aa13.33□□□□□ -0.28
PHRF1-206ENST00000534320 MRPL23Q16540 153 aaKnown RBP13.33□□□□□ -0.28
PHRF1-206ENST00000534320 DEFB136Q30KP8 78 aa13.33□□□□□ -0.28
PHRF1-206ENST00000534320 PLA2G5P39877 138 aa13.32□□□□□ -0.28
PHRF1-206ENST00000534320 FSTL3O95633 263 aa13.32□□□□□ -0.28
PHRF1-206ENST00000534320 LMO4P61968 165 aa13.32□□□□□ -0.28
PHRF1-206ENST00000534320 ZNF503Q96F45 646 aa13.32□□□□□ -0.28
PHRF1-206ENST00000534320 PIEZO2Q9H5I5 2752 aa13.32□□□□□ -0.28
PHRF1-206ENST00000534320 TAX1BP3O14907 124 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 IGF2RP11717 2491 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 ARHGAP21Q5T5U3 1957 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 C19orf84I3L1E1 186 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 BRK1Q8WUW1 75 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 Q71RC1 249 aaPredicted RBP13.31□□□□□ -0.28
PHRF1-206ENST00000534320 TNCP24821 2201 aa13.31□□□□□ -0.28
PHRF1-206ENST00000534320 K7EMI3 77 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 PSMB8P28062 276 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 ATP6V0E2Q8NHE4 81 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 CFHR3Q02985 330 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 ATP5G1P05496 136 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 GTSF1Q8WW33 167 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 NCOR2Q9Y618 2525 aa13.3□□□□□ -0.28
PHRF1-206ENST00000534320 hADV29S1A0JD25 119 aa13.29□□□□□ -0.28
PHRF1-206ENST00000534320 NUPR1O60356 82 aa13.29□□□□□ -0.28
PHRF1-206ENST00000534320 MRPL55Q7Z7F7 128 aaKnown RBP13.29□□□□□ -0.28
PHRF1-206ENST00000534320 PIEZO1Q92508 2521 aa13.29□□□□□ -0.28
PHRF1-206ENST00000534320 PRAC2D3DTV9 90 aa13.29□□□□□ -0.28
PHRF1-206ENST00000534320 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
PHRF1-206ENST00000534320 HERVK_113P63121 156 aa13.29□□□□□ -0.28
PHRF1-206ENST00000534320 SRSF2Q01130 221 aaKnown RBP13.29□□□□□ -0.28
PHRF1-206ENST00000534320 SLURP1P55000 103 aa13.28□□□□□ -0.28
PHRF1-206ENST00000534320 SPATA25Q9BR10 227 aa13.28□□□□□ -0.28
PHRF1-206ENST00000534320 LINC01620Q4KN68 170 aa13.28□□□□□ -0.28
PHRF1-206ENST00000534320 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
PHRF1-206ENST00000534320 TDRG1Q3Y452 100 aa13.27□□□□□ -0.29
PHRF1-206ENST00000534320 ZNRF2Q8NHG8 242 aa13.27□□□□□ -0.29
PHRF1-206ENST00000534320 CCL24O00175 119 aa13.27□□□□□ -0.29
PHRF1-206ENST00000534320 SPRY2O43597 315 aa13.27□□□□□ -0.29
PHRF1-206ENST00000534320 NOTCH2Q04721 2471 aa13.27□□□□□ -0.29
PHRF1-206ENST00000534320 MSRB1Q9NZV6 116 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 GATA1P15976 413 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-206ENST00000534320 C3orf56Q8N813 242 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 WFDC9Q8NEX5 89 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 IGHV3-38A0A0C4DH36 116 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 NXPH4O95158 308 aa13.26□□□□□ -0.29
PHRF1-206ENST00000534320 IGKV3D-7A0A0C4DH55 119 aa13.25□□□□□ -0.29
PHRF1-206ENST00000534320 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
PHRF1-206ENST00000534320 A6NDX4 124 aa13.25□□□□□ -0.29
PHRF1-206ENST00000534320 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
PHRF1-206ENST00000534320 ANKRD39Q53RE8 183 aa13.25□□□□□ -0.29
PHRF1-206ENST00000534320 H0YGX0 51 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 K7EMT4 169 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 C9orf47Q6ZRZ4 202 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 RNF183Q96D59 192 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 CRYGBP07316 175 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 UTRNP46939 3433 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 IGHV4OR15-8A0A075B7B6 117 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 A0A087WW49 117 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 FRMD6-AS1P0C7T7 363 aa13.24□□□□□ -0.29
PHRF1-206ENST00000534320 C11orf71Q6IPW1 123 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 GPHB5Q86YW7 130 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 V9GYY9 64 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 LY6LH3BQJ8 138 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 FXYD2P54710 66 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 MP68P56378 58 aa13.23□□□□□ -0.29
PHRF1-206ENST00000534320 ZFP2Q6ZN57 461 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 TLN1Q9Y490 2541 aaKnown RBP13.22□□□□□ -0.29
PHRF1-206ENST00000534320 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 LINC01548A6NM66 108 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 UNQ9165/PRO28630Q6UXU0 137 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
PHRF1-206ENST00000534320 COL5A1P20908 1838 aaPredicted RBP13.21□□□□□ -0.29
PHRF1-206ENST00000534320 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
PHRF1-206ENST00000534320 TRBV12-3P01733 135 aa13.21□□□□□ -0.29
PHRF1-206ENST00000534320 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
PHRF1-206ENST00000534320 CCDC140Q96MF4 163 aa13.21□□□□□ -0.29
PHRF1-206ENST00000534320 H3BT86 120 aa13.21□□□□□ -0.29
PHRF1-206ENST00000534320 DAD1P61803 113 aa13.21□□□□□ -0.3
PHRF1-206ENST00000534320 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.3
PHRF1-206ENST00000534320 RHOHQ15669 191 aa13.21□□□□□ -0.3
PHRF1-206ENST00000534320 TRBV10-2A0A0K0K1G8 114 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms