RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.33
MCF2L-227ENST00000486806 SSTP61278 116 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 HBBP68871 147 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 RIGQ13278 110 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 ELOBQ15370 118 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 TWIST1Q15672 202 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 TMEM88Q6PEY1 159 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 Q6ZTC4 211 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 SMCO4Q9NRQ5 59 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 MUC4Q99102 2169 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 TRBV24-1A0A075B6N3 115 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 A0A087WWL8 130 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 RHODO00212 210 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 SCO1O75880 301 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 EVI2AP22794 236 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 LINC00315P59091 139 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 RASL11AQ6T310 242 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 ZFP2Q6ZN57 461 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 C14orf178Q8N769 122 aaPredicted RBP6.76□□□□□ -1.33
MCF2L-227ENST00000486806 ZNF479Q96JC4 524 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 TMEM191AQ9H0A3 160 aa6.76□□□□□ -1.33
MCF2L-227ENST00000486806 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 TGIF2-C20orf24A0A0A6YYL0 155 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 CIDEAO60543 219 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 ATP5G1P05496 136 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 HOXA5P20719 270 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 OR4C5Q8NGB2 326 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 DPH3P1Q9H4G8 78 aa6.75□□□□□ -1.33
MCF2L-227ENST00000486806 S100A8P05109 93 aa6.74□□□□□ -1.33
MCF2L-227ENST00000486806 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
MCF2L-227ENST00000486806 CAMPP49913 170 aa6.74□□□□□ -1.33
MCF2L-227ENST00000486806 FHL2Q14192 279 aa6.74□□□□□ -1.33
MCF2L-227ENST00000486806 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
MCF2L-227ENST00000486806 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
MCF2L-227ENST00000486806 IGHV3-73A0A0B4J1V6 119 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 TMEM136Q6ZRR5 245 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 Q6ZSN1 163 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 SMIM15Q7Z3B0 74 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
MCF2L-227ENST00000486806 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
MCF2L-227ENST00000486806 CSMD3Q7Z407 3707 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 TRAV10A0A0B4J240 114 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 RAB4AP20338 218 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 RAB4BP61018 213 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 ZNF56Q15929 161 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 FAM104BQ5XKR9 115 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 SUMO4Q6EEV6 95 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 FAM210BQ96KR6 192 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 GNB1LQ9BYB4 327 aa6.72□□□□□ -1.33
MCF2L-227ENST00000486806 DEFB131BA0A096LNP1 70 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 COLCA2A8K830 154 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 F5H768 121 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 K7EQD1 137 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 HLA-DQA1P01909 254 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 MT-ND6P03923 174 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 MGPP08493 103 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 HTN3P15516 51 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 CRYBA4P53673 196 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 SLAQ13239 276 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 COX19Q49B96 90 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 PHLDA1Q8WV24 401 aaPredicted RBP6.71□□□□□ -1.34
MCF2L-227ENST00000486806 FRZBQ92765 325 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
MCF2L-227ENST00000486806 TRAV26-2A0A0B4J265 109 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 M0QY20 66 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 LINC00694P0DN24 101 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 RHOHQ15669 191 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
MCF2L-227ENST00000486806 MRAP2Q96G30 205 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 VSIG2Q96IQ7 327 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 WWC2-AS2Q96NR7 200 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
MCF2L-227ENST00000486806 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 F5H697 171 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 H3BNG1 76 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 GAS8-AS1O95177 125 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 P0DMU3 169 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 FAM231AP0DMU4 169 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 FAM231CP0DMU5 169 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 Q9UF83 564 aa6.69□□□□□ -1.34
MCF2L-227ENST00000486806 A0A0J9YY99 117 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 LOC100131303A0A0U1RQF7 123 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 NUPR2A6NF83 97 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 D6R8Y8 96 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 H7C1H1 209 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 PAX4O43316 350 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 NCR2O95944 276 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 APCSP02743 223 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 RAB5AP20339 215 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 RPS10P46783 165 aaKnown RBP6.68□□□□□ -1.34
MCF2L-227ENST00000486806 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
MCF2L-227ENST00000486806 NRACQ8N912 160 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms