RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 RIGQ13278 110 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 MUC7Q8TAX7 377 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 SAMD10Q9BYL1 202 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 NUPR2A6NF83 97 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 MGPP08493 103 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 HOXA5P20719 270 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 S100PP25815 95 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 ZNF56Q15929 161 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
UPF2-204ENST00000460569 KCNIP4Q6PIL6 250 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 SMIM15Q7Z3B0 74 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
UPF2-204ENST00000460569 TMEM242Q9NWH2 141 aa7.17□□□□□ -1.26
UPF2-204ENST00000460569 CIDEAO60543 219 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 CRYGDP07320 174 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 EVI2AP22794 236 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 FHL2Q14192 279 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 ATRAIDQ6UW56 229 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 IMMP2LQ96T52 175 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 URGCP-MRPS24S4R325 110 aa7.16□□□□□ -1.26
UPF2-204ENST00000460569 TRAV26-1A0A087WT03 109 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 A0A0J9YY99 117 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 ATP6V1G1O75348 118 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 GATA1P15976 413 aaPredicted RBP7.15□□□□□ -1.26
UPF2-204ENST00000460569 CAMPP49913 170 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 HBBP68871 147 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 UFSP1Q6NVU6 142 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 TMEM88Q6PEY1 159 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 CEMP1Q6PRD7 247 aaPredicted RBP7.15□□□□□ -1.26
UPF2-204ENST00000460569 ATP5L2Q7Z4Y8 100 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 BTF3L4Q96K17 158 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 PRO0255Q9UI72 69 aa7.15□□□□□ -1.26
UPF2-204ENST00000460569 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 A0A1B0GW15 77 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 A0A1B0GXF2 115 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 IGLL5B9A064 214 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 F5H697 171 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 PAX4O43316 350 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 S100A8P05109 93 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 CRYBA4P53673 196 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 SLAQ13239 276 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 HHLA3Q9XRX5 114 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
UPF2-204ENST00000460569 KIF25-AS1Q9Y6Z4 181 aa7.14□□□□□ -1.27
UPF2-204ENST00000460569 K7EQD1 137 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 RAB4BP61018 213 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 RHOHQ15669 191 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 Q6ZSN1 163 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 FAM210BQ96KR6 192 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 PRADC1Q9BSG0 188 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 TMEM191AQ9H0A3 160 aa7.13□□□□□ -1.27
UPF2-204ENST00000460569 TRBV6-4A0A1B0GX49 114 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 C3orf84H3BNL1 204 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 LINC00315P59091 139 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 CBLN2Q8IUK8 224 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
UPF2-204ENST00000460569 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 NUDT3O95989 172 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 P0DMU3 169 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 FAM231CP0DMU5 169 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 GYPEP15421 78 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 S100A1P23297 94 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 SMCO4Q9NRQ5 59 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
UPF2-204ENST00000460569 TGIF2-C20orf24A0A0A6YYL0 155 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 H3BNG1 76 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 H7C1H1 209 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 ELOBQ15370 118 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 FAM104BQ5XKR9 115 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 RASL11AQ6T310 242 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 GATD1Q8NB37 220 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
UPF2-204ENST00000460569 A0A096LPF7 62 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 TRBV10-1A0A0K0K1A3 114 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 M0QY20 66 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 NCR2O95944 276 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 RAB4AP20338 218 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 SRIP30626 198 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 GAGE1Q13065 139 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 GAGE4Q13068 117 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 GAGE5Q13069 117 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 MRPL23Q16540 153 aaKnown RBP7.09□□□□□ -1.27
UPF2-204ENST00000460569 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
UPF2-204ENST00000460569 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 MRAP2Q96G30 205 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 Q9UF83 564 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 APLNQ9ULZ1 77 aa7.09□□□□□ -1.27
UPF2-204ENST00000460569 TRBV24-1A0A075B6N3 115 aa7.08□□□□□ -1.28
UPF2-204ENST00000460569 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms