RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 C14orf178Q8N769 122 aaPredicted RBP19.15■□□□□ 0.66
HDAC3-201ENST00000305264 HOXA5P20719 270 aa19.14■□□□□ 0.65
HDAC3-201ENST00000305264 EVI2AP22794 236 aa19.14■□□□□ 0.65
HDAC3-201ENST00000305264 UFSP1Q6NVU6 142 aa19.14■□□□□ 0.65
HDAC3-201ENST00000305264 RIGQ13278 110 aa19.13■□□□□ 0.65
HDAC3-201ENST00000305264 CSMD3Q7Z407 3707 aa19.13■□□□□ 0.65
HDAC3-201ENST00000305264 TRGC1P0CF51 173 aa19.13■□□□□ 0.65
HDAC3-201ENST00000305264 S100PP25815 95 aa19.12■□□□□ 0.65
HDAC3-201ENST00000305264 KIF25-AS1Q9Y6Z4 181 aa19.12■□□□□ 0.65
HDAC3-201ENST00000305264 A0A1B0GXF2 115 aa19.12■□□□□ 0.65
HDAC3-201ENST00000305264 BTF3L4Q96K17 158 aa19.12■□□□□ 0.65
HDAC3-201ENST00000305264 CAMPP49913 170 aa19.11■□□□□ 0.65
HDAC3-201ENST00000305264 TMEM88Q6PEY1 159 aa19.11■□□□□ 0.65
HDAC3-201ENST00000305264 CBLN2Q8IUK8 224 aa19.11■□□□□ 0.65
HDAC3-201ENST00000305264 DEFB131BA0A096LNP1 70 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 F5H768 121 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 S100A1P23297 94 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 FHL2Q14192 279 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 HBBP68871 147 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 ZFP2Q6ZN57 461 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 ATP5L2Q7Z4Y8 100 aa19.1■□□□□ 0.65
HDAC3-201ENST00000305264 PHLDA1Q8WV24 401 aaPredicted RBP19.1■□□□□ 0.65
HDAC3-201ENST00000305264 TRAV10A0A0B4J240 114 aa19.09■□□□□ 0.65
HDAC3-201ENST00000305264 SMIM17P0DL12 118 aa19.09■□□□□ 0.65
HDAC3-201ENST00000305264 WWC2-AS2Q96NR7 200 aa19.09■□□□□ 0.65
HDAC3-201ENST00000305264 TRGV4A0A0C4DH28 118 aa19.08■□□□□ 0.65
HDAC3-201ENST00000305264 RHODO00212 210 aa19.08■□□□□ 0.65
HDAC3-201ENST00000305264 LINC00315P59091 139 aa19.08■□□□□ 0.65
HDAC3-201ENST00000305264 TRAV9-1A0A075B6T8 112 aa19.08■□□□□ 0.64
HDAC3-201ENST00000305264 Q6ZSN1 163 aa19.08■□□□□ 0.64
HDAC3-201ENST00000305264 DPH3P1Q9H4G8 78 aa19.08■□□□□ 0.64
HDAC3-201ENST00000305264 A0A1B0GW15 77 aa19.07■□□□□ 0.64
HDAC3-201ENST00000305264 ELOBQ15370 118 aa19.07■□□□□ 0.64
HDAC3-201ENST00000305264 SCO1O75880 301 aa19.06■□□□□ 0.64
HDAC3-201ENST00000305264 MGPP08493 103 aa19.06■□□□□ 0.64
HDAC3-201ENST00000305264 ZNF56Q15929 161 aa19.06■□□□□ 0.64
HDAC3-201ENST00000305264 SMIM15Q7Z3B0 74 aa19.06■□□□□ 0.64
HDAC3-201ENST00000305264 TMEM191AQ9H0A3 160 aa19.06■□□□□ 0.64
HDAC3-201ENST00000305264 GATA1P15976 413 aaPredicted RBP19.05■□□□□ 0.64
HDAC3-201ENST00000305264 SMCO4Q9NRQ5 59 aa19.05■□□□□ 0.64
HDAC3-201ENST00000305264 STARD9Q9P2P6 4700 aa19.05■□□□□ 0.64
HDAC3-201ENST00000305264 TGIF2-C20orf24A0A0A6YYL0 155 aa19.04■□□□□ 0.64
HDAC3-201ENST00000305264 CIDEAO60543 219 aa19.04■□□□□ 0.64
HDAC3-201ENST00000305264 YPEL4Q96NS1 127 aa19.04■□□□□ 0.64
HDAC3-201ENST00000305264 DYNC2H1Q8NCM8 4307 aaKnown RBP19.04■□□□□ 0.64
HDAC3-201ENST00000305264 HHLA3Q9XRX5 114 aa19.03■□□□□ 0.64
HDAC3-201ENST00000305264 TRAV26-1A0A087WT03 109 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 AMN1Q8IY45 258 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 SLC25A29Q8N8R3 303 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 MUC7Q8TAX7 377 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 A0A0J9YY99 117 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 F5H697 171 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 S100A8P05109 93 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 CRYBA4P53673 196 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 GATD1Q8NB37 220 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 PRO0255Q9UI72 69 aa19.02■□□□□ 0.64
HDAC3-201ENST00000305264 RAB4BP61018 213 aa19.01■□□□□ 0.63
HDAC3-201ENST00000305264 RNF185Q96GF1 192 aa19.01■□□□□ 0.63
HDAC3-201ENST00000305264 VSIG2Q96IQ7 327 aa19.01■□□□□ 0.63
HDAC3-201ENST00000305264 ZFAND6Q6FIF0 208 aa19■□□□□ 0.63
HDAC3-201ENST00000305264 TRBV24-1A0A075B6N3 115 aa18.99■□□□□ 0.63
HDAC3-201ENST00000305264 SUMO4Q6EEV6 95 aa18.99■□□□□ 0.63
HDAC3-201ENST00000305264 TRAV26-2A0A0B4J265 109 aa18.99■□□□□ 0.63
HDAC3-201ENST00000305264 CEMP1Q6PRD7 247 aaPredicted RBP18.99■□□□□ 0.63
HDAC3-201ENST00000305264 RASL11AQ6T310 242 aa18.99■□□□□ 0.63
HDAC3-201ENST00000305264 Q9UF83 564 aa18.99■□□□□ 0.63
HDAC3-201ENST00000305264 TRBV6-4A0A1B0GX49 114 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 K7EQD1 137 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 PAX4O43316 350 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 P0DMU3 169 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 FAM231AP0DMU4 169 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 FAM231CP0DMU5 169 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 SLAQ13239 276 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 FAM104BQ5XKR9 115 aa18.98■□□□□ 0.63
HDAC3-201ENST00000305264 RAB4AP20338 218 aa18.97■□□□□ 0.63
HDAC3-201ENST00000305264 TMEM136Q6ZRR5 245 aa18.97■□□□□ 0.63
HDAC3-201ENST00000305264 LOC100131303A0A0U1RQF7 123 aa18.97■□□□□ 0.63
HDAC3-201ENST00000305264 NUPR2A6NF83 97 aa18.97■□□□□ 0.63
HDAC3-201ENST00000305264 RHOHQ15669 191 aa18.96■□□□□ 0.63
HDAC3-201ENST00000305264 IGLL5B9A064 214 aa18.95■□□□□ 0.62
HDAC3-201ENST00000305264 M0QY20 66 aa18.95■□□□□ 0.62
HDAC3-201ENST00000305264 FAM210BQ96KR6 192 aa18.95■□□□□ 0.62
HDAC3-201ENST00000305264 GAS8-AS1O95177 125 aa18.94■□□□□ 0.62
HDAC3-201ENST00000305264 MRPL51Q4U2R6 128 aaKnown RBP18.94■□□□□ 0.62
HDAC3-201ENST00000305264 GYPEP15421 78 aa18.93■□□□□ 0.62
HDAC3-201ENST00000305264 PLECQ15149 4684 aaKnown RBP18.93■□□□□ 0.62
HDAC3-201ENST00000305264 PRADC1Q9BSG0 188 aa18.93■□□□□ 0.62
HDAC3-201ENST00000305264 TENM2Q9NT68 2774 aa18.93■□□□□ 0.62
HDAC3-201ENST00000305264 SMKR1H3BMG3 65 aa18.92■□□□□ 0.62
HDAC3-201ENST00000305264 NCR2O95944 276 aa18.92■□□□□ 0.62
HDAC3-201ENST00000305264 GNB1LQ9BYB4 327 aa18.92■□□□□ 0.62
HDAC3-201ENST00000305264 H3BNG1 76 aa18.9■□□□□ 0.62
HDAC3-201ENST00000305264 KLK5Q9Y337 293 aaPredicted RBP18.9■□□□□ 0.62
HDAC3-201ENST00000305264 H7C1H1 209 aa18.9■□□□□ 0.62
HDAC3-201ENST00000305264 HLA-DQA1P01909 254 aa18.9■□□□□ 0.62
HDAC3-201ENST00000305264 NEXN-AS1Q8NBZ9 246 aa18.9■□□□□ 0.62
HDAC3-201ENST00000305264 RPL39LQ96EH5 51 aaKnown RBP18.9■□□□□ 0.62
HDAC3-201ENST00000305264 MRAP2Q96G30 205 aa18.9■□□□□ 0.62
HDAC3-201ENST00000305264 TRBV10-1A0A0K0K1A3 114 aa18.89■□□□□ 0.61
HDAC3-201ENST00000305264 COX19Q49B96 90 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms