RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 COL5A1P20908 1838 aaPredicted RBP6.96□□□□□ -1.29
TTC28-208ENST00000612946 ZNF462Q96JM2 2506 aa6.96□□□□□ -1.29
TTC28-208ENST00000612946 H3BUA1 57 aa6.96□□□□□ -1.29
TTC28-208ENST00000612946 VPREB1P12018 145 aa6.96□□□□□ -1.29
TTC28-208ENST00000612946 CFHR1Q03591 330 aa6.96□□□□□ -1.29
TTC28-208ENST00000612946 NREPQ16612 68 aa6.96□□□□□ -1.29
TTC28-208ENST00000612946 A0A1B0GXF2 115 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 Q9H8V8 135 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 CSRP2Q16527 193 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 MIAQ16674 131 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 NDUFA4O00483 81 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 CCL19Q99731 98 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 UBE2AP49459 152 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.3
TTC28-208ENST00000612946 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.3
TTC28-208ENST00000612946 VMO1Q7Z5L0 202 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 GGNQ86UU5 652 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 SAP25Q8TEE9 199 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 TMEM200BQ69YZ2 307 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 ZNF837Q96EG3 531 aaPredicted RBP6.95□□□□□ -1.3
TTC28-208ENST00000612946 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 IGLV3-1P01715 115 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 DSCR9P59020 149 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 CD177Q8N6Q3 437 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 S4R3C0 116 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 PTPRSQ13332 1948 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 TRBV30A0A0K0K1B3 111 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 FAM120AOSQ5T036 256 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 RMI2Q96E14 147 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 SLC25A45Q8N413 288 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 GAFA1Q96PS6 74 aa6.95□□□□□ -1.3
TTC28-208ENST00000612946 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 TMEM61Q8N0U2 210 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
TTC28-208ENST00000612946 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
TTC28-208ENST00000612946 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
TTC28-208ENST00000612946 C20orf204Q6ZNR8 217 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 BLCAPP62952 87 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 RFPL3SP0C7P2 107 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 EFNA4P52798 201 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 ATP5J2P56134 94 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 FDCSPQ8NFU4 85 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 FN1P02751 2386 aaKnown RBP6.94□□□□□ -1.3
TTC28-208ENST00000612946 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 IGHV1-46P01743 117 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 CSDC2Q9Y534 153 aaKnown RBP6.94□□□□□ -1.3
TTC28-208ENST00000612946 NUPR1O60356 82 aa6.94□□□□□ -1.3
TTC28-208ENST00000612946 TRBV12-3P01733 135 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 CRYGCP07315 174 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 GP9P14770 177 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 CFAP126Q5VTH2 177 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 IGKV1-16P04430 117 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 RAI1Q7Z5J4 1906 aaPredicted RBP6.93□□□□□ -1.3
TTC28-208ENST00000612946 C5orf63A6NC05 138 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 TIMM17BO60830 172 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 LY6EQ16553 131 aa6.93□□□□□ -1.3
TTC28-208ENST00000612946 EIF4EBP1Q13541 118 aaPredicted RBP6.92□□□□□ -1.3
TTC28-208ENST00000612946 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 FAM168AQ92567 244 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 TRAV25A0A0B4J276 109 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 ELANEP08246 267 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 SETD2Q9BYW2 2564 aaPredicted RBP6.92□□□□□ -1.3
TTC28-208ENST00000612946 K7ERS5 55 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 NRGNQ92686 78 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 RHPN1-AS1Q9BWJ2 59 aa6.92□□□□□ -1.3
TTC28-208ENST00000612946 RNASE6Q93091 150 aaKnown RBP6.92□□□□□ -1.3
TTC28-208ENST00000612946 RPP25Q9BUL9 199 aaKnown RBP6.92□□□□□ -1.3
TTC28-208ENST00000612946 MRPL36Q9P0J6 103 aaKnown RBP6.92□□□□□ -1.3
TTC28-208ENST00000612946 CLPSP04118 112 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 SEC61GP60059 68 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 C10orf55Q5SWW7 151 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 MDFICQ9P1T7 246 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 NXPH4O95158 308 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 FAM201AQ5SY85 155 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 NCOR2Q9Y618 2525 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 IGHV3OR16-8A0A075B7F1 116 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 IGHV1-18A0A0C4DH31 117 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
TTC28-208ENST00000612946 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 WIPF3A6NGB9 483 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 UFSP1Q6NVU6 142 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 STPG1Q5TH74 334 aa6.91□□□□□ -1.3
TTC28-208ENST00000612946 TLN1Q9Y490 2541 aaKnown RBP6.9□□□□□ -1.3
TTC28-208ENST00000612946 SPAARA0A1B0GVQ0 90 aa6.9□□□□□ -1.3
TTC28-208ENST00000612946 HIST2H2BCQ6DN03 193 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms