RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 VPS25Q9BRG1 176 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 ERG28Q9UKR5 140 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 DNAJC15Q9Y5T4 150 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 EP300Q09472 2414 aaPredicted RBP1.63□□□□□ -2.15
SQLE-204ENST00000520493 PTPRFP10586 1907 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 CLIP1P30622 1438 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 NCOA3Q9Y6Q9 1424 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 HEATR1Q9H583 2144 aaKnown RBP1.63□□□□□ -2.15
SQLE-204ENST00000520493 KIF21BO75037 1637 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 HERC2O95714 4834 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 MAPKBP1O60336 1514 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 PRUNE2Q8WUY3 3088 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 KIAA1549LQ6ZVL6 1849 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 LOC110117498A0A087WWA1 95 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 C3orf85A0A1B0GTC6 90 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 F8W1H4 67 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 INE1O15225 51 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 HCRTO43612 131 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 NUPR1O60356 82 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 TPST1O60507 370 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 IGHV3-33P01772 117 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 CD14P08571 375 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 LINC00694P0DN24 101 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 KDELR1P24390 212 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 CKS2P33552 79 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 DNAJB13P59910 316 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 PCBD1P61457 104 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 RPS25P62851 125 aaKnown RBP1.62□□□□□ -2.15
SQLE-204ENST00000520493 MPV17LQ2QL34 196 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 IZUMO2Q6UXV1 221 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 C10orf111Q8N326 155 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 OTOSQ8NHW6 89 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 SLC35B3Q9H1N7 401 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 COMMD3Q9UBI1 195 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 TNFSF18Q9UNG2 199 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 VPS8Q8N3P4 1428 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 MUC4Q99102 2169 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 MYOFQ9NZM1 2061 aa1.62□□□□□ -2.15
SQLE-204ENST00000520493 EXPH5Q8NEV8 1989 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 TNRC6BQ9UPQ9 1833 aaKnown RBP1.61□□□□□ -2.15
SQLE-204ENST00000520493 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.61□□□□□ -2.15
SQLE-204ENST00000520493 CD3DP04234 171 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 CFTRP13569 1480 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 IGF2RP11717 2491 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 SIP14410 1827 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 VPS13AQ96RL7 3174 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 INTS1Q8N201 2190 aaKnown RBP1.61□□□□□ -2.15
SQLE-204ENST00000520493 ERICH3Q5RHP9 1530 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 EHBP1L1Q8N3D4 1523 aa1.61□□□□□ -2.15
SQLE-204ENST00000520493 NWD1Q149M9 1564 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 ALPK3Q96L96 1907 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 FGD6Q6ZV73 1430 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 PTPRZ1P23471 2315 aaPredicted RBP1.6□□□□□ -2.15
SQLE-204ENST00000520493 LRP6O75581 1613 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 BIVM-ERCC5R4GMW8 1640 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 IGKV3D-7A0A0C4DH55 119 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 IGKV3OR2-268A0A0C4DH90 116 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 A6NN06 94 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 H3BRM9 83 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 RBP4P02753 201 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 SELENOWP63302 87 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 PLGLB1Q02325 96 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 ZCCHC23Q6ZST2 131 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 UHRF1BP1LA0JNW5 1464 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 PRXQ9BXM0 1461 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 RAPGEF2Q9Y4G8 1499 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 COL4A1P02462 1669 aa1.6□□□□□ -2.15
SQLE-204ENST00000520493 MXRA5Q9NR99 2828 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 LRBAP50851 2863 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.15
SQLE-204ENST00000520493 IGHV1-24A0A0C4DH33 117 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 K7ERU9 68 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 NPFFO15130 113 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 COPZ1P61923 177 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 RPL13AP3Q6NVV1 102 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 ATOH7Q8N100 152 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 SMIM7Q9BQ49 75 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 LPAR5Q9H1C0 372 aa1.59□□□□□ -2.15
SQLE-204ENST00000520493 CUX1P39880 1505 aa1.59□□□□□ -2.16
SQLE-204ENST00000520493 MAP3K1Q13233 1512 aa1.59□□□□□ -2.16
SQLE-204ENST00000520493 MYH13Q9UKX3 1938 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 WDR7Q9Y4E6 1490 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 ZZEF1O43149 2961 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 LOC400499M0QZD8 3231 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 TRBV20-1A0A075B6N2 111 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 EDF1O60869 148 aaKnown RBP1.58□□□□□ -2.16
SQLE-204ENST00000520493 LINC00299Q6ZSB3 139 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 SAR1AQ9NR31 198 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 HELZP42694 1942 aaKnown RBP1.58□□□□□ -2.16
SQLE-204ENST00000520493 CCNB3Q8WWL7 1395 aa1.58□□□□□ -2.16
SQLE-204ENST00000520493 PPRC1Q5VV67 1664 aaKnown RBP1.58□□□□□ -2.16
SQLE-204ENST00000520493 TNRC6AQ8NDV7 1962 aaKnown RBP1.58□□□□□ -2.16
SQLE-204ENST00000520493 ERBINQ96RT1 1412 aa1.57□□□□□ -2.16
SQLE-204ENST00000520493 RRBP1Q9P2E9 1410 aaKnown RBP1.57□□□□□ -2.16
SQLE-204ENST00000520493 GRIN2AQ12879 1464 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms