RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 SPRY2O43597 315 aa16.29■□□□□ 0.2
USP48-205ENST00000421625 MSRB2Q9Y3D2 182 aa16.29■□□□□ 0.2
USP48-205ENST00000421625 C15orf32Q32M92 178 aa16.29■□□□□ 0.2
USP48-205ENST00000421625 ABCA4P78363 2273 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 TRAV26-1A0A087WT03 109 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 IGHV7-81A0A0B4J1V7 117 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 H3BVH4 76 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 LGALS1P09382 135 aaKnown RBP16.28■□□□□ 0.2
USP48-205ENST00000421625 SMIM2Q9BVW6 85 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 PGPEP1Q9NXJ5 209 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 TRAV8-2A0A0B4J237 113 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 RAB9AP51151 201 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 TMEM78Q5T7P6 136 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 RAXQ9Y2V3 346 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 CACNA1BQ00975 2339 aa16.28■□□□□ 0.2
USP48-205ENST00000421625 TRAV12-1A0A0B4J245 112 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 CLEC3BP05452 202 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 LINC01560Q8TB33 94 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 CLPSL1A2RUU4 121 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
USP48-205ENST00000421625 APOMO95445 188 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 SCGB3A1Q96QR1 104 aa16.27■□□□□ 0.2
USP48-205ENST00000421625 SFTA2Q6UW10 78 aa16.27■□□□□ 0.19
USP48-205ENST00000421625 Q8N6K4 173 aa16.27■□□□□ 0.19
USP48-205ENST00000421625 SLC50A1Q9BRV3 221 aa16.27■□□□□ 0.19
USP48-205ENST00000421625 LINC01619G3V211 115 aa16.25■□□□□ 0.19
USP48-205ENST00000421625 SMCPP49901 116 aaPredicted RBP16.25■□□□□ 0.19
USP48-205ENST00000421625 CKS1BP61024 79 aa16.25■□□□□ 0.19
USP48-205ENST00000421625 ECSCRQ19T08 205 aa16.25■□□□□ 0.19
USP48-205ENST00000421625 PRR9Q5T870 116 aa16.25■□□□□ 0.19
USP48-205ENST00000421625 NEXN-AS1Q8NBZ9 246 aa16.25■□□□□ 0.19
USP48-205ENST00000421625 MRPL16Q9NX20 251 aaKnown RBP16.25■□□□□ 0.19
USP48-205ENST00000421625 PIEZO1Q92508 2521 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 J3KRW8 73 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 PRTN3P24158 256 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 VMO1Q7Z5L0 202 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 IGHV4-4A0A075B6R2 117 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 PRADC1Q9BSG0 188 aa16.24■□□□□ 0.19
USP48-205ENST00000421625 TOMM6Q96B49 74 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 RPL39LQ96EH5 51 aaKnown RBP16.23■□□□□ 0.19
USP48-205ENST00000421625 IGF1P05019 195 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 CRYBA4P53673 196 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 FOXI1Q12951 378 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 SCGB2A2Q13296 93 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 C8orf86Q6ZUL3 223 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 PLEKHB2Q96CS7 222 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 LINC01549A6NIU2 74 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 CFAP126Q5VTH2 177 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 CLEC19AQ6UXS0 136 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 RASL10AQ92737 203 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 MRAP2Q96G30 205 aa16.23■□□□□ 0.19
USP48-205ENST00000421625 NFE4Q86UQ8 179 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 C1QTNF4Q9BXJ3 329 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 M0R381 172 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 Q8N9W7 124 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 SYT8Q8NBV8 401 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 BAALCQ8WXS3 180 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 CCDC140Q96MF4 163 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 VKORC1Q9BQB6 163 aa16.22■□□□□ 0.19
USP48-205ENST00000421625 ZNF815PA8K554 130 aa16.21■□□□□ 0.19
USP48-205ENST00000421625 M0R1W7 72 aa16.21■□□□□ 0.19
USP48-205ENST00000421625 SUMO2P61956 95 aaKnown RBP16.21■□□□□ 0.19
USP48-205ENST00000421625 ORMDL2Q53FV1 153 aa16.21■□□□□ 0.19
USP48-205ENST00000421625 ASH1LQ9NR48 2969 aaKnown RBP16.21■□□□□ 0.19
USP48-205ENST00000421625 GRNP28799 593 aaKnown RBP16.21■□□□□ 0.19
USP48-205ENST00000421625 CDIP1Q9H305 208 aa16.21■□□□□ 0.19
USP48-205ENST00000421625 ZFP2Q6ZN57 461 aa16.2■□□□□ 0.18
USP48-205ENST00000421625 PRSS29PA6NIE9 313 aa16.2■□□□□ 0.18
USP48-205ENST00000421625 TCTEX1D4Q5JR98 221 aa16.2■□□□□ 0.18
USP48-205ENST00000421625 C9orf47Q6ZRZ4 202 aa16.2■□□□□ 0.18
USP48-205ENST00000421625 DLX4Q92988 240 aaPredicted RBP16.2■□□□□ 0.18
USP48-205ENST00000421625 LOC107984156A0A0G2JMH3 177 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 PSMB2P49721 201 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 FHL3Q13643 280 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 SCGB1D4Q6XE38 83 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 ARL17AQ8IVW1 177 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 FAM110DQ8TAY7 271 aaPredicted RBP16.19■□□□□ 0.18
USP48-205ENST00000421625 SPTBN1Q01082 2364 aaKnown RBP16.19■□□□□ 0.18
USP48-205ENST00000421625 MED13LQ71F56 2210 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 ANKHD1Q8IWZ3 2542 aaKnown RBP16.19■□□□□ 0.18
USP48-205ENST00000421625 TSPAN13O95857 204 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 SLC25A16P16260 332 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 C2orf66Q6UXQ4 117 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 PTH2Q96A98 100 aa16.19■□□□□ 0.18
USP48-205ENST00000421625 ATP6V0E1O15342 81 aa16.18■□□□□ 0.18
USP48-205ENST00000421625 EBI3Q14213 229 aa16.18■□□□□ 0.18
USP48-205ENST00000421625 KLHL30-AS1Q8NEE0 82 aa16.18■□□□□ 0.18
USP48-205ENST00000421625 GLMPQ8WWB7 406 aa16.18■□□□□ 0.18
USP48-205ENST00000421625 C14orf178Q8N769 122 aaPredicted RBP16.18■□□□□ 0.18
USP48-205ENST00000421625 ZNF418Q8TF45 676 aaPredicted RBP16.18■□□□□ 0.18
USP48-205ENST00000421625 RNF223E7ERA6 249 aa16.18■□□□□ 0.18
USP48-205ENST00000421625 LINC01548A6NM66 108 aa16.17■□□□□ 0.18
USP48-205ENST00000421625 G3V318 75 aa16.17■□□□□ 0.18
USP48-205ENST00000421625 SRSF9Q13242 221 aaKnown RBP eCLIP16.17■□□□□ 0.18
USP48-205ENST00000421625 UBE2D1P51668 147 aa16.17■□□□□ 0.18
USP48-205ENST00000421625 HIF1ANQ9NWT6 349 aa16.17■□□□□ 0.18
USP48-205ENST00000421625 ITPR1Q14643 2758 aa16.16■□□□□ 0.18
USP48-205ENST00000421625 COX6B1P14854 86 aa16.16■□□□□ 0.18
USP48-205ENST00000421625 MGPP08493 103 aa16.16■□□□□ 0.18
USP48-205ENST00000421625 C20orf173Q96LM9 149 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms