RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C17orf77Q96MU5 243 aa11.3□□□□□ -0.6
CUX2-201ENST00000261726 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
CUX2-201ENST00000261726 NDUFS7O75251 213 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 WT1-ASQ06250 92 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 FOXE3Q13461 319 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 CFPP27918 469 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
CUX2-201ENST00000261726 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
CUX2-201ENST00000261726 IGFBPL1Q8WX77 278 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 CCL24O00175 119 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 C14orf132Q9NPU4 83 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 TRIOBPQ9H2D6 2365 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 MED12Q93074 2177 aa11.28□□□□□ -0.6
CUX2-201ENST00000261726 EP300Q09472 2414 aaPredicted RBP11.27□□□□□ -0.6
CUX2-201ENST00000261726 COX7B2Q8TF08 81 aa11.27□□□□□ -0.6
CUX2-201ENST00000261726 DYNAPQ8N1N2 210 aa11.27□□□□□ -0.61
CUX2-201ENST00000261726 FXYD5Q96DB9 178 aa11.27□□□□□ -0.61
CUX2-201ENST00000261726 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.61
CUX2-201ENST00000261726 DOCK7Q96N67 2140 aa11.27□□□□□ -0.61
CUX2-201ENST00000261726 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
CUX2-201ENST00000261726 C20orf78Q9BR46 151 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 C8orf31Q8N9H6 132 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 GYPEP15421 78 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 LMO1P25800 156 aa11.26□□□□□ -0.61
CUX2-201ENST00000261726 HOXB4P17483 251 aaPredicted RBP11.26□□□□□ -0.61
CUX2-201ENST00000261726 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
CUX2-201ENST00000261726 ELANEP08246 267 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 ABCA4P78363 2273 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 NCR3O14931 201 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 CFC1P0CG37 223 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 SLURP1P55000 103 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
CUX2-201ENST00000261726 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
CUX2-201ENST00000261726 UBE2AP49459 152 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
CUX2-201ENST00000261726 NDUFB1O75438 58 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 IGLC1P0CG04 106 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 SS18L2Q9UHA2 77 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 TICRRQ7Z2Z1 1910 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 CACNA1EQ15878 2313 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
CUX2-201ENST00000261726 ICOSQ9Y6W8 199 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 IGKV3D-7A0A0C4DH55 119 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
CUX2-201ENST00000261726 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 HIST2H2BCQ6DN03 193 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 GATA1P15976 413 aaPredicted RBP11.23□□□□□ -0.61
CUX2-201ENST00000261726 CCL18P55774 89 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 NPBQ8NG41 125 aa11.23□□□□□ -0.61
CUX2-201ENST00000261726 K7EM74 188 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 CCL25O15444 150 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 TCF20Q9UGU0 1960 aaKnown RBP11.22□□□□□ -0.61
CUX2-201ENST00000261726 KIAA1671Q9BY89 1806 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
CUX2-201ENST00000261726 ABCA1O95477 2261 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 LTAP01374 205 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 C15orf65H3BRN8 121 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 HERV-K104P63124 156 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
CUX2-201ENST00000261726 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
CUX2-201ENST00000261726 K7EQD1 137 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 COX7A2LO14548 114 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 MP68P56378 58 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
CUX2-201ENST00000261726 K7EN84 100 aa11.21□□□□□ -0.62
CUX2-201ENST00000261726 GP9P14770 177 aa11.21□□□□□ -0.62
CUX2-201ENST00000261726 C9orf66Q5T8R8 295 aa11.21□□□□□ -0.62
CUX2-201ENST00000261726 B5MCH6 92 aa11.21□□□□□ -0.62
CUX2-201ENST00000261726 A0A1B0GX51 115 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 ATP6V0E2Q8NHE4 81 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 SEM1Q6ZVN7 128 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 SPATA25Q9BR10 227 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
CUX2-201ENST00000261726 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
CUX2-201ENST00000261726 KIF26AQ9ULI4 1882 aaPredicted RBP11.2□□□□□ -0.62
CUX2-201ENST00000261726 NREPQ16612 68 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms