RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 EVI2AP22794 236 aa13.2□□□□□ -0.3
NEK3-206ENST00000611833 ARL3P36405 182 aa13.2□□□□□ -0.3
NEK3-206ENST00000611833 ANKRD39Q53RE8 183 aa13.2□□□□□ -0.3
NEK3-206ENST00000611833 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
NEK3-206ENST00000611833 COL12A1Q99715 3063 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 DPF1Q92782 380 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 VAMP3Q15836 100 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 SMIM15Q7Z3B0 74 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 ATP6V0BQ99437 205 aa13.19□□□□□ -0.3
NEK3-206ENST00000611833 NXT2Q9NPJ8 142 aaKnown RBP13.19□□□□□ -0.3
NEK3-206ENST00000611833 LEPP41159 167 aa13.18□□□□□ -0.3
NEK3-206ENST00000611833 C2orf91Q6ZV80 131 aa13.18□□□□□ -0.3
NEK3-206ENST00000611833 DEFB125Q8N687 156 aa13.18□□□□□ -0.3
NEK3-206ENST00000611833 TAX1BP3O14907 124 aa13.18□□□□□ -0.3
NEK3-206ENST00000611833 TCTAP57738 103 aa13.18□□□□□ -0.3
NEK3-206ENST00000611833 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
NEK3-206ENST00000611833 FOXE3Q13461 319 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 LY6EQ16553 131 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 ERASQ7Z444 233 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 IGHV4-38-2P0DP08 117 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 CRIP2P52943 208 aaPredicted RBP13.17□□□□□ -0.3
NEK3-206ENST00000611833 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 CCL19Q99731 98 aa13.17□□□□□ -0.3
NEK3-206ENST00000611833 CBY3A6NI87 242 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 FCER1GP30273 86 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 PKD1L2Q7Z442 2459 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 SPTAN1Q13813 2472 aaKnown RBP13.16□□□□□ -0.3
NEK3-206ENST00000611833 LINC01546A6NGU7 62 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 SPANXN1Q5VSR9 72 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 Q6ZQT7 251 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 UFC1Q9Y3C8 167 aa13.16□□□□□ -0.3
NEK3-206ENST00000611833 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 TRBV12-3P01733 135 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 FGF6P10767 208 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 UNQ9165/PRO28630Q6UXU0 137 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
NEK3-206ENST00000611833 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
NEK3-206ENST00000611833 CD5LO43866 347 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 OR2K2Q8NGT1 345 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 J3KRW8 73 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 NDUFA4O00483 81 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 IGF1P05019 195 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 TMEM97Q5BJF2 176 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 OR4C5Q8NGB2 326 aa13.14□□□□□ -0.31
NEK3-206ENST00000611833 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 Q8N8P6 123 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 IGHV4-30-2A0A087WSY4 118 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 H3BUX3 64 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 PRSS1P07477 247 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 NMUP48645 174 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 TMEM158Q8WZ71 300 aa13.13□□□□□ -0.31
NEK3-206ENST00000611833 RPL11P62913 178 aaKnown RBP13.12□□□□□ -0.31
NEK3-206ENST00000611833 CLEC2AQ6UVW9 174 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 OR10J6PQ8NGY7 276 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 USMG5Q96IX5 58 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 H3BVH4 76 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 PRR9Q5T870 116 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
NEK3-206ENST00000611833 A1L4Q6 167 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 NDUFS8O00217 210 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 PF4V1P10720 104 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 ATP5J2P56134 94 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 IGHG2P01859 326 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 SEC11AP67812 179 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
NEK3-206ENST00000611833 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 OVOL1O14753 267 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 IGLV2-18A0A075B6J9 118 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 H3BUA1 57 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 ODF1Q14990 250 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 NRACQ8N912 160 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 OR4X2Q8NGF9 303 aa13.1□□□□□ -0.31
NEK3-206ENST00000611833 C7orf71A4D174 169 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 A6NDX4 124 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 BLCAPP62952 87 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 PCP2Q8IVA1 136 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 FOXC2Q99958 501 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 CELSR2Q9HCU4 2923 aa13.09□□□□□ -0.31
NEK3-206ENST00000611833 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.31
NEK3-206ENST00000611833 SIVA1O15304 175 aa13.08□□□□□ -0.31
NEK3-206ENST00000611833 LAGE3Q14657 143 aa13.08□□□□□ -0.31
NEK3-206ENST00000611833 Q6ZS46 218 aa13.08□□□□□ -0.31
NEK3-206ENST00000611833 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms