RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SPRY2O43597 315 aa13.86□□□□□ -0.19
APP-202ENST00000348990 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
APP-202ENST00000348990 PAX8Q06710 450 aa13.86□□□□□ -0.19
APP-202ENST00000348990 DEFB104AQ8WTQ1 72 aa13.86□□□□□ -0.19
APP-202ENST00000348990 TNRC18O15417 2968 aaPredicted RBP13.86□□□□□ -0.19
APP-202ENST00000348990 CSMD1Q96PZ7 3565 aa13.86□□□□□ -0.19
APP-202ENST00000348990 OR11H12B2RN74 326 aa13.85□□□□□ -0.19
APP-202ENST00000348990 F8W1H4 67 aa13.85□□□□□ -0.19
APP-202ENST00000348990 SCGB1D4Q6XE38 83 aa13.85□□□□□ -0.19
APP-202ENST00000348990 OR11H1Q8NG94 326 aa13.85□□□□□ -0.19
APP-202ENST00000348990 OR11H2Q8NH07 326 aa13.85□□□□□ -0.19
APP-202ENST00000348990 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
APP-202ENST00000348990 TNFRSF13BO14836 293 aaPredicted RBP13.85□□□□□ -0.19
APP-202ENST00000348990 LAGE3Q14657 143 aa13.85□□□□□ -0.19
APP-202ENST00000348990 CFHR4Q92496 578 aa13.85□□□□□ -0.19
APP-202ENST00000348990 SPANXB1Q9NS25 103 aaPredicted RBP13.85□□□□□ -0.19
APP-202ENST00000348990 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
APP-202ENST00000348990 INSL3P51460 131 aa13.85□□□□□ -0.19
APP-202ENST00000348990 SMPXQ9UHP9 88 aa13.85□□□□□ -0.19
APP-202ENST00000348990 Q8N8P6 123 aa13.84□□□□□ -0.19
APP-202ENST00000348990 FANCD2OSQ96PS1 177 aa13.84□□□□□ -0.19
APP-202ENST00000348990 SRSF9Q13242 221 aaKnown RBP eCLIP13.84□□□□□ -0.19
APP-202ENST00000348990 ECSCRQ19T08 205 aa13.84□□□□□ -0.19
APP-202ENST00000348990 Q6ZS92 163 aa13.84□□□□□ -0.19
APP-202ENST00000348990 C5orf64Q2M2E5 130 aa13.83□□□□□ -0.19
APP-202ENST00000348990 MRPL16Q9NX20 251 aaKnown RBP13.83□□□□□ -0.19
APP-202ENST00000348990 SPTAN1Q13813 2472 aaKnown RBP13.83□□□□□ -0.2
APP-202ENST00000348990 E9PLD3 99 aa13.83□□□□□ -0.2
APP-202ENST00000348990 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
APP-202ENST00000348990 CEACAM3P40198 252 aa13.83□□□□□ -0.2
APP-202ENST00000348990 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
APP-202ENST00000348990 TM2D2Q9BX73 214 aa13.82□□□□□ -0.2
APP-202ENST00000348990 APOMO95445 188 aa13.82□□□□□ -0.2
APP-202ENST00000348990 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
APP-202ENST00000348990 NDUFS8O00217 210 aa13.82□□□□□ -0.2
APP-202ENST00000348990 CD3EP07766 207 aa13.82□□□□□ -0.2
APP-202ENST00000348990 CKS1BP61024 79 aa13.82□□□□□ -0.2
APP-202ENST00000348990 PHLDA1Q8WV24 401 aaPredicted RBP13.82□□□□□ -0.2
APP-202ENST00000348990 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
APP-202ENST00000348990 VKORC1Q9BQB6 163 aa13.82□□□□□ -0.2
APP-202ENST00000348990 SMAD5-AS1Q9Y6J3 95 aa13.82□□□□□ -0.2
APP-202ENST00000348990 M0R381 172 aa13.81□□□□□ -0.2
APP-202ENST00000348990 TGFAP01135 160 aa13.81□□□□□ -0.2
APP-202ENST00000348990 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
APP-202ENST00000348990 ZNF502Q8TBZ5 544 aa13.81□□□□□ -0.2
APP-202ENST00000348990 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
APP-202ENST00000348990 H3BVH4 76 aa13.81□□□□□ -0.2
APP-202ENST00000348990 ARL3P36405 182 aa13.81□□□□□ -0.2
APP-202ENST00000348990 NDPQ00604 133 aa13.81□□□□□ -0.2
APP-202ENST00000348990 RNF5Q99942 180 aa13.81□□□□□ -0.2
APP-202ENST00000348990 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
APP-202ENST00000348990 IGLV11-55A0A075B6I3 123 aa13.8□□□□□ -0.2
APP-202ENST00000348990 HOXA3O43365 443 aaPredicted RBP13.8□□□□□ -0.2
APP-202ENST00000348990 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
APP-202ENST00000348990 RAB9AP51151 201 aa13.8□□□□□ -0.2
APP-202ENST00000348990 SRSF1Q07955 248 aaKnown RBP eCLIP13.8□□□□□ -0.2
APP-202ENST00000348990 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
APP-202ENST00000348990 CLEC3BP05452 202 aa13.8□□□□□ -0.2
APP-202ENST00000348990 CTSGP08311 255 aa13.8□□□□□ -0.2
APP-202ENST00000348990 PSMB2P49721 201 aa13.8□□□□□ -0.2
APP-202ENST00000348990 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
APP-202ENST00000348990 ZMAT4Q9H898 229 aa13.8□□□□□ -0.2
APP-202ENST00000348990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
APP-202ENST00000348990 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
APP-202ENST00000348990 Q6ZQT7 251 aa13.79□□□□□ -0.2
APP-202ENST00000348990 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
APP-202ENST00000348990 MGPP08493 103 aa13.79□□□□□ -0.2
APP-202ENST00000348990 RRN3P1Q2M238 152 aa13.79□□□□□ -0.2
APP-202ENST00000348990 A0A087WX48 190 aa13.79□□□□□ -0.2
APP-202ENST00000348990 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
APP-202ENST00000348990 C20orf78Q9BR46 151 aa13.79□□□□□ -0.2
APP-202ENST00000348990 TMEM190Q8WZ59 177 aa13.78□□□□□ -0.2
APP-202ENST00000348990 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
APP-202ENST00000348990 AGPAT4-IT1Q9H0P7 198 aa13.78□□□□□ -0.2
APP-202ENST00000348990 B9A039 149 aa13.77□□□□□ -0.2
APP-202ENST00000348990 C15orf32Q32M92 178 aa13.77□□□□□ -0.2
APP-202ENST00000348990 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.2
APP-202ENST00000348990 LRBAP50851 2863 aa13.77□□□□□ -0.21
APP-202ENST00000348990 IGHG4P01861 327 aa13.77□□□□□ -0.21
APP-202ENST00000348990 PLNP26678 52 aa13.77□□□□□ -0.21
APP-202ENST00000348990 EMP1P54849 157 aa13.77□□□□□ -0.21
APP-202ENST00000348990 CLEC19AQ6UXS0 136 aa13.77□□□□□ -0.21
APP-202ENST00000348990 F8W735 103 aaPredicted RBP13.76□□□□□ -0.21
APP-202ENST00000348990 H7C1H1 209 aa13.76□□□□□ -0.21
APP-202ENST00000348990 SYT8Q8NBV8 401 aa13.76□□□□□ -0.21
APP-202ENST00000348990 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
APP-202ENST00000348990 COL6A6A6NMZ7 2263 aa13.76□□□□□ -0.21
APP-202ENST00000348990 ZNF815PA8K554 130 aa13.76□□□□□ -0.21
APP-202ENST00000348990 ZNF672Q499Z4 452 aaPredicted RBP13.76□□□□□ -0.21
APP-202ENST00000348990 MYMXA0A1B0GTQ4 84 aa13.75□□□□□ -0.21
APP-202ENST00000348990 LINC01549A6NIU2 74 aa13.75□□□□□ -0.21
APP-202ENST00000348990 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
APP-202ENST00000348990 FAM90A27PA6NNH2 459 aa13.75□□□□□ -0.21
APP-202ENST00000348990 IGFL3Q6UXB1 125 aa13.75□□□□□ -0.21
APP-202ENST00000348990 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
APP-202ENST00000348990 F8VRH5 84 aa13.74□□□□□ -0.21
APP-202ENST00000348990 LY6LH3BQJ8 138 aa13.74□□□□□ -0.21
APP-202ENST00000348990 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
APP-202ENST00000348990 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
APP-202ENST00000348990 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms