RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TVP23BQ9NYZ1 205 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 FBXO5Q9UKT4 447 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 EPDR1Q9UM22 224 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 MON2Q7Z3U7 1717 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 DOT1LQ8TEK3 1739 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 PARP4Q9UKK3 1724 aaKnown RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 TOGARAM1Q9Y4F4 1720 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 INTS1Q8N201 2190 aaKnown RBP0.57□□□□□ -2.32
ITGB1-216ENST00000493758 PKHD1L1Q86WI1 4243 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 BTAF1O14981 1849 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 ROBO3Q96MS0 1386 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 MYOFQ9NZM1 2061 aa0.57□□□□□ -2.32
ITGB1-216ENST00000493758 STARD9Q9P2P6 4700 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 FHAD1B1AJZ9 1412 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 TECPR2O15040 1411 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 CCDC18Q5T9S5 1454 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 LRRC37AA6NMS7 1700 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 PKDREJQ9NTG1 2253 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ARHGAP5Q13017 1502 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ZNF682O95780 498 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 HAND1O96004 215 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 S100A6P06703 90 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 CCL7P80098 99 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 PDE6HQ13956 83 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 LINC01554Q52M75 96 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 BRMS1LQ5PSV4 323 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 LYRM7Q5U5X0 104 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 Q6Q795 121 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 LCA10Q71F78 164 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 FAM19A2Q8N3H0 131 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 OR52R1Q8NGF1 315 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 OR2T10Q8NGZ9 312 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 SLC25A40Q8TBP6 338 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 GNPDA2Q8TDQ7 276 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 C4orf3Q8WVX3 66 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ITFG2Q969R8 447 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 SIGMAR1Q99720 223 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 HIST1H2BLQ99880 126 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 C6orf62Q9GZU0 229 aaPredicted RBP0.56□□□□□ -2.32
ITGB1-216ENST00000493758 RNASE7Q9H1E1 156 aaKnown RBP0.56□□□□□ -2.32
ITGB1-216ENST00000493758 NMNAT1Q9HAN9 279 aaPredicted RBP0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ACER3Q9NUN7 267 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 RASL12Q9NYN1 266 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 IDI2-AS1Q9NZ38 188 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 HS3ST2Q9Y278 367 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 UTP11Q9Y3A2 253 aaKnown RBP0.56□□□□□ -2.32
ITGB1-216ENST00000493758 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ACACAQ13085 2346 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 HEATR5BQ9P2D3 2071 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 APOBP04114 4563 aaKnown RBP0.56□□□□□ -2.32
ITGB1-216ENST00000493758 ARFGEF3Q5TH69 2177 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 SCN10AQ9Y5Y9 1956 aa0.56□□□□□ -2.32
ITGB1-216ENST00000493758 PIK3C2GO75747 1445 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TROQ12816 1431 aaPredicted RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 ADGRL3Q9HAR2 1447 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 LY75O60449 1722 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 AKAP12Q02952 1782 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 FER1L6Q2WGJ9 1857 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 VPS13DQ5THJ4 4388 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 DOCK5Q9H7D0 1870 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 CFAP74Q9C0B2 1584 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TRAV3A0A0B4J244 114 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TRAV12-1A0A0B4J245 112 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 IGKV1-9A0A0C4DH69 117 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 CYB5BO43169 146 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 OR7C1O76099 320 aaPredicted RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 ERP29P30040 261 aaKnown RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 EIF5AP63241 154 aaKnown RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 FADDQ13158 208 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TSNQ15631 228 aaKnown RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 LIN52Q52LA3 116 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 C12orf45Q8N5I9 185 aaPredicted RBP0.55□□□□□ -2.32
ITGB1-216ENST00000493758 LINC00301Q8NCQ3 95 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 OR10J5Q8NHC4 309 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TEX47Q8TBZ9 253 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 TLNRD1Q9H1K6 362 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 ARL2BPQ9Y2Y0 163 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 C22orf24Q9Y442 160 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 VPS13BQ7Z7G8 4022 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 DNAH2Q9P225 4427 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 BCL9O00512 1426 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 ZFYVE9O95405 1425 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 SCAPERQ9BY12 1400 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 NCOA3Q9Y6Q9 1424 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 ALPK2Q86TB3 2170 aa0.55□□□□□ -2.32
ITGB1-216ENST00000493758 GOLGA3Q08378 1498 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 MBD5Q9P267 1494 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 ANAPC1Q9H1A4 1944 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 PLXNC1O60486 1568 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 TRPM1Q7Z4N2 1603 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 KIF1AQ12756 1690 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 LMO7Q8WWI1 1683 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 ALS2Q96Q42 1657 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 LOC110117498A0A087WWA1 95 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 TRBV6-8A0A0A6YYG3 113 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 CLDN25C9JDP6 229 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 LYZL6O75951 148 aa0.54□□□□□ -2.32
ITGB1-216ENST00000493758 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
ITGB1-216ENST00000493758 DEFA3P59666 94 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms