RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 H3BRM9 83 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 SP9P0CG40 484 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS26B-201ENST00000281187 SRSF6Q13247 344 aaKnown RBP11.42□□□□□ -0.58
VPS26B-201ENST00000281187 ETDBQ3ZM63 59 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 ADAMTSL5Q6ZMM2 481 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 MDS2Q8NDY4 140 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
VPS26B-201ENST00000281187 CNTFRP26992 372 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 LOXL1Q08397 574 aaPredicted RBP11.41□□□□□ -0.58
VPS26B-201ENST00000281187 MYOZ3Q8TDC0 251 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
VPS26B-201ENST00000281187 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
VPS26B-201ENST00000281187 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
VPS26B-201ENST00000281187 FAM120AOSQ5T036 256 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
VPS26B-201ENST00000281187 NGBQ9NPG2 151 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 NDUFA3O95167 84 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 OR9G4Q8NGQ1 327 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 SIGLEC8Q9NYZ4 499 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 WDFY3Q8IZQ1 3526 aa11.41□□□□□ -0.58
VPS26B-201ENST00000281187 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 A0A1W2PPM0 123 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 AZU1P20160 251 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 MSMPQ1L6U9 139 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
VPS26B-201ENST00000281187 C8orf49Q96NF6 230 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 ZNF479Q96JC4 524 aa11.4□□□□□ -0.58
VPS26B-201ENST00000281187 COL4A2P08572 1712 aa11.4□□□□□ -0.59
VPS26B-201ENST00000281187 TNRC6AQ8NDV7 1962 aaKnown RBP11.4□□□□□ -0.59
VPS26B-201ENST00000281187 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 TM4SF5O14894 197 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 CD40P25942 277 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 ZNF71Q9NQZ8 489 aaPredicted RBP11.39□□□□□ -0.59
VPS26B-201ENST00000281187 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 C22orf46C9J442 243 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 UBALD2Q8IYN6 164 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 LGALS7P47929 136 aa11.39□□□□□ -0.59
VPS26B-201ENST00000281187 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
VPS26B-201ENST00000281187 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.595e-8■■■■□ 19.4
VPS26B-201ENST00000281187 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
VPS26B-201ENST00000281187 C1orf162Q8NEQ5 155 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-201ENST00000281187 PPP1R27Q86WC6 154 aa11.38□□□□□ -0.59
VPS26B-201ENST00000281187 JMJD8Q96S16 334 aa11.38□□□□□ -0.59
VPS26B-201ENST00000281187 LTAP01374 205 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 CLEC3BP05452 202 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 TTC9CQ8N5M4 171 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 CHAC1Q9BUX1 264 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 SLC25A15Q9Y619 301 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 H3BMG7 143 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 RITA1Q96K30 269 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 IGKV3-7A0A075B6H7 116 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 HAX1O00165 279 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 POU2AF1Q16633 256 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 CT83Q5H943 113 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 LYPD2Q6UXB3 125 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 RNF125Q96EQ8 232 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 GFRA4Q9GZZ7 299 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
VPS26B-201ENST00000281187 TRGV9Q99603 122 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 DOPEY2Q9Y3R5 2298 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 LYNX1G3V0Z9 82 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 NPYP01303 97 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 LYNX1P0DP58 116 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 Q71RC1 249 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-201ENST00000281187 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 H7C2G1 150 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 APOMO95445 188 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
VPS26B-201ENST00000281187 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
VPS26B-201ENST00000281187 FOXE3Q13461 319 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 SH2D1AO60880 128 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 IGKCP01834 107 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 RPL7P18124 248 aaKnown RBP11.35□□□□□ -0.59
VPS26B-201ENST00000281187 BMI1P35226 326 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 FXYD2P54710 66 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 MRPL51Q4U2R6 128 aaKnown RBP11.35□□□□□ -0.59
VPS26B-201ENST00000281187 Q6AWC8 147 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 NPFFR1Q9GZQ6 430 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 CEP192Q8TEP8 1941 aa11.35□□□□□ -0.59
VPS26B-201ENST00000281187 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
VPS26B-201ENST00000281187 DSCAMO60469 2012 aa11.34□□□□□ -0.59
VPS26B-201ENST00000281187 G3V4G9 280 aa11.34□□□□□ -0.59
VPS26B-201ENST00000281187 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
VPS26B-201ENST00000281187 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms