Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.04■■■■□ 3.2
SP9P0CG40 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
SP9P0CG40 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.64■■■■□ 3.14
SP9P0CG40 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SP9P0CG40 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SP9P0CG40 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.55■■■□□ 2.96
SP9P0CG40 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
SP9P0CG40 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
SP9P0CG40 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.42■■■□□ 2.94
SP9P0CG40 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.34■■■□□ 2.93
SP9P0CG40 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SP9P0CG40 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.07■■■□□ 2.88
SP9P0CG40 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.01■■■□□ 2.87
SP9P0CG40 AL356512.1-201ENST00000607453 1739 ntBASIC32.99■■■□□ 2.87
SP9P0CG40 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SP9P0CG40 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SP9P0CG40 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
SP9P0CG40 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
SP9P0CG40 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
SP9P0CG40 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SP9P0CG40 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
SP9P0CG40 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SP9P0CG40 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SP9P0CG40 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.43■■■□□ 2.78
SP9P0CG40 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SP9P0CG40 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
SP9P0CG40 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.19■■■□□ 2.74
SP9P0CG40 ZNRF2P1-201ENST00000441407 443 ntBASIC32.13■■■□□ 2.73
SP9P0CG40 AC006077.2-201ENST00000623591 457 ntBASIC32.07■■■□□ 2.72
SP9P0CG40 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.94■■■□□ 2.7
SP9P0CG40 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SP9P0CG40 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
SP9P0CG40 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.73■■■□□ 2.67
SP9P0CG40 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SP9P0CG40 AC015813.7-201ENST00000623294 581 ntBASIC31.63■■■□□ 2.65
SP9P0CG40 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SP9P0CG40 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.4■■■□□ 2.62
SP9P0CG40 AP002365.1-201ENST00000603448 772 ntBASIC31.31■■■□□ 2.6
SP9P0CG40 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SP9P0CG40 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SP9P0CG40 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.18■■■□□ 2.58
SP9P0CG40 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SP9P0CG40 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.12■■■□□ 2.57
SP9P0CG40 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.1■■■□□ 2.57
SP9P0CG40 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SP9P0CG40 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SP9P0CG40 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
SP9P0CG40 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.04■■■□□ 2.56
SP9P0CG40 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.99■■■□□ 2.55
SP9P0CG40 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.89■■■□□ 2.54
SP9P0CG40 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
SP9P0CG40 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.88■■■□□ 2.53
SP9P0CG40 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SP9P0CG40 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.83■■■□□ 2.53
SP9P0CG40 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.81■■■□□ 2.52
SP9P0CG40 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SP9P0CG40 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.77■■■□□ 2.52
SP9P0CG40 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SP9P0CG40 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.7■■■□□ 2.51
SP9P0CG40 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SP9P0CG40 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SP9P0CG40 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
SP9P0CG40 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SP9P0CG40 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SP9P0CG40 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SP9P0CG40 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.52■■■□□ 2.48
SP9P0CG40 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
SP9P0CG40 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SP9P0CG40 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.48■■■□□ 2.47
SP9P0CG40 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SP9P0CG40 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SP9P0CG40 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.45■■■□□ 2.47
SP9P0CG40 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SP9P0CG40 DYNLL1-208ENST00000550178 581 ntBASIC30.36■■■□□ 2.45
SP9P0CG40 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.34■■■□□ 2.45
SP9P0CG40 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SP9P0CG40 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SP9P0CG40 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
SP9P0CG40 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.24■■■□□ 2.43
SP9P0CG40 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SP9P0CG40 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SP9P0CG40 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SP9P0CG40 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.17■■■□□ 2.42
SP9P0CG40 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SP9P0CG40 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.16■■■□□ 2.42
SP9P0CG40 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SP9P0CG40 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.14■■■□□ 2.42
SP9P0CG40 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
SP9P0CG40 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.12■■■□□ 2.41
SP9P0CG40 AL031258.1-201ENST00000623562 325 ntBASIC30.12■■■□□ 2.41
SP9P0CG40 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.1■■■□□ 2.41
SP9P0CG40 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SP9P0CG40 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SP9P0CG40 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SP9P0CG40 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SP9P0CG40 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SP9P0CG40 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.05■■■□□ 2.4
SP9P0CG40 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.05■■■□□ 2.4
SP9P0CG40 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.03■■■□□ 2.4
SP9P0CG40 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms