RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SRIP30626 198 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 KRTAP12-4P60329 112 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 LINC01554Q52M75 96 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 LCN15Q6UWW0 184 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 MIR17HGQ75NE6 70 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 DHFR2Q86XF0 187 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 KRT222Q8N1A0 295 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ZNF439Q8NDP4 499 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 OR8B3Q8NGG8 313 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 AP3S1Q92572 193 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ZNF625Q96I27 306 aaPredicted RBP1.18□□□□□ -2.22
CD44-234ENST00000531873 CEP19Q96LK0 163 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 SCGB3A1Q96QR1 104 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 PHB2Q99623 299 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ERGIC3Q9Y282 383 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ANAPC1Q9H1A4 1944 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 DUOX2Q9NRD8 1548 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 LAMB4A4D0S4 1761 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ABCA6Q8N139 1617 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 FAM186AA6NE01 2351 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 ATP7BP35670 1465 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 PXDNQ92626 1479 aa1.18□□□□□ -2.22
CD44-234ENST00000531873 MARF1Q9Y4F3 1742 aaKnown RBP1.18□□□□□ -2.22
CD44-234ENST00000531873 SAMD9Q5K651 1589 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 COL4A6Q14031 1691 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 TOPAZ1Q8N9V7 1692 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 CDH23Q9H251 3354 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 SPTBN2O15020 2390 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 TRAV4A0A0B4J268 109 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 ZNF860A6NHJ4 632 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 TMEM238C9JI98 176 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 ORC5O43913 435 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 CTSDP07339 412 aaPredicted RBP1.17□□□□□ -2.22
CD44-234ENST00000531873 CRYGAP11844 174 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 IL9P15248 144 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 MAGEA12P43365 314 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 HSPE1P61604 102 aaKnown RBP1.17□□□□□ -2.22
CD44-234ENST00000531873 ZNF345Q14585 488 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 Q6ZQT0 140 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 LCA10Q71F78 164 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 TMEM86AQ8N2M4 240 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 WFDC5Q8TCV5 224 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 GNPDA2Q8TDQ7 276 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 DNAJC9Q8WXX5 260 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 C2orf50Q96LR7 162 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 RNF122Q9H9V4 155 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 C8orf4Q9NR00 106 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 SLC39A9Q9NUM3 307 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 TVP23BQ9NYZ1 205 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 PTPN23Q9H3S7 1636 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 PHRF1Q9P1Y6 1649 aaKnown RBP1.17□□□□□ -2.22
CD44-234ENST00000531873 KIAA0100Q14667 2235 aaKnown RBP1.17□□□□□ -2.22
CD44-234ENST00000531873 RTL1A6NKG5 1358 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 FRYQ5TBA9 3013 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 ARHGEF5Q12774 1597 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
CD44-234ENST00000531873 PKD1L1Q8TDX9 2849 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 SPEGQ15772 3267 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 EXPH5Q8NEV8 1989 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 EP300Q09472 2414 aaPredicted RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 DCHS1Q96JQ0 3298 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 TRAPPC13A5PLN9 417 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 HTR1AP08908 422 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 CASP1P29466 404 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 ERP29P30040 261 aaKnown RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 ATP5G3P48201 142 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 GNG10P50151 68 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 KRR1Q13601 381 aaKnown RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 NNATQ16517 81 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 Q1T7F1 81 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 ARHGAP11BQ3KRB8 267 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 FAM173BQ6P4H8 233 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 C7orf65Q6ZTY9 151 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 LYG2Q86SG7 212 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 HIST3H2BBQ8N257 126 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 ADAT3Q96EY9 351 aaPredicted RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 PRRT1Q99946 306 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 TMEM133Q9H2Q1 129 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 STOML2Q9UJZ1 356 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 EIF3AQ14152 1382 aaKnown RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 TONSLQ96HA7 1378 aa1.16□□□□□ -2.22
CD44-234ENST00000531873 COL1A1P02452 1464 aaPredicted RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 DSPP15924 2871 aaKnown RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 ANKHD1Q8IWZ3 2542 aaKnown RBP1.16□□□□□ -2.22
CD44-234ENST00000531873 CASKIN1Q8WXD9 1431 aa1.15□□□□□ -2.22
CD44-234ENST00000531873 UBR4Q5T4S7 5183 aa1.15□□□□□ -2.22
CD44-234ENST00000531873 ZZEF1O43149 2961 aa1.15□□□□□ -2.22
CD44-234ENST00000531873 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 A0A0D9SG52 128 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 C19orf84I3L1E1 186 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 PMP2P02689 132 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 METTL15P1P0C7V9 234 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 G0S2P27469 103 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 COA5Q86WW8 74 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 SIGLECL1Q8N7X8 197 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 OR5A1Q8NGJ0 315 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 Q96M85 177 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 OSTCQ9NRP0 149 aa1.15□□□□□ -2.23
CD44-234ENST00000531873 CKLFQ9UBR5 152 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms