RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W VMA2P16140 517 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W VPH2P32341 215 aa2.29□□□□□ -2.04
SEC16YPL085W BEM3P32873 1128 aa2.29□□□□□ -2.04
SEC16YPL085W GEM1P39722 662 aa2.29□□□□□ -2.04
SEC16YPL085W TFG1P41895 735 aaPredicted RBP2.29□□□□□ -2.04
SEC16YPL085W EPL1P43572 832 aa2.29□□□□□ -2.04
SEC16YPL085W TRF5P48561 642 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W DBP6P53734 629 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W MUB1Q03162 620 aa2.29□□□□□ -2.04
SEC16YPL085W YLR012CQ07927 99 aa2.29□□□□□ -2.04
SEC16YPL085W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SEC16YPL085W RRP6Q12149 733 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W NFI1Q12216 726 aa2.29□□□□□ -2.04
SEC16YPL085W THS1P04801 734 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W WHI2P12611 486 aa2.29□□□□□ -2.04
SEC16YPL085W COQ1P18900 473 aa2.29□□□□□ -2.04
SEC16YPL085W PHO91P27514 894 aa2.29□□□□□ -2.04
SEC16YPL085W SGE1P33335 543 aa2.29□□□□□ -2.04
SEC16YPL085W MCR1P36060 302 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W KAP104P38217 918 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W YBR096WP38256 230 aa2.29□□□□□ -2.04
SEC16YPL085W DYS1P38791 387 aa2.29□□□□□ -2.04
SEC16YPL085W FAA4P47912 694 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W LYS4P49367 693 aaPredicted RBP2.29□□□□□ -2.04
SEC16YPL085W GIM3P53900 129 aa2.29□□□□□ -2.04
SEC16YPL085W IMP4P53941 290 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W YPL014WQ02606 381 aa2.29□□□□□ -2.04
SEC16YPL085W PET117Q02771 107 aa2.29□□□□□ -2.04
SEC16YPL085W LEE1Q02799 301 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W ECI1Q05871 280 aa2.29□□□□□ -2.04
SEC16YPL085W SPP382Q06411 708 aaPredicted RBP2.29□□□□□ -2.04
SEC16YPL085W HBT1Q07653 1046 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W AIM39Q08223 395 aa2.29□□□□□ -2.04
SEC16YPL085W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SEC16YPL085W PHO84P25297 587 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W APE2P32454 952 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W TFC3P34111 1160 aa2.29□□□□□ -2.04
SEC16YPL085W TEF4P36008 412 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W SUL1P38359 859 aa2.29□□□□□ -2.04
SEC16YPL085W RTC3P38804 111 aaPredicted RBP2.29□□□□□ -2.04
SEC16YPL085W SSP120P39931 234 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W YJL107CP42947 387 aa2.29□□□□□ -2.04
SEC16YPL085W PSP2P50109 593 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W PIB2P53191 635 aa2.29□□□□□ -2.04
SEC16YPL085W RPT4P53549 437 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W UTP6Q02354 440 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W TFB2Q02939 513 aa2.29□□□□□ -2.04
SEC16YPL085W LDB18Q07887 179 aa2.29□□□□□ -2.04
SEC16YPL085W CUE5Q08412 411 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W YNG1Q08465 219 aa2.29□□□□□ -2.04
SEC16YPL085W GPM3Q12326 303 aa2.29□□□□□ -2.04
SEC16YPL085W TRM11Q12463 433 aa2.29□□□□□ -2.04
SEC16YPL085W SRN2Q99176 213 aa2.29□□□□□ -2.04
SEC16YPL085W MPD2Q99316 277 aa2.29□□□□□ -2.04
SEC16YPL085W FBP1P09201 348 aa2.28□□□□□ -2.04
SEC16YPL085W PLC1P32383 869 aa2.28□□□□□ -2.04
SEC16YPL085W DUR3P33413 735 aa2.28□□□□□ -2.04
SEC16YPL085W DEF1P35732 738 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W HES1P35843 434 aa2.28□□□□□ -2.04
SEC16YPL085W DDI1P40087 428 aa2.28□□□□□ -2.04
SEC16YPL085W BUR6P40096 142 aa2.28□□□□□ -2.04
SEC16YPL085W YRB2P40517 327 aa2.28□□□□□ -2.04
SEC16YPL085W CTF18P49956 741 aa2.28□□□□□ -2.04
SEC16YPL085W YNL143CP53908 130 aa2.28□□□□□ -2.04
SEC16YPL085W YMR187CQ03236 431 aa2.28□□□□□ -2.04
SEC16YPL085W RRB1Q04225 511 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W YLR177WQ06251 628 aa2.28□□□□□ -2.04
SEC16YPL085W VTA1Q06263 330 aa2.28□□□□□ -2.04
SEC16YPL085W ATG23Q06671 453 aa2.28□□□□□ -2.04
SEC16YPL085W MLH2Q07980 695 aa2.28□□□□□ -2.04
SEC16YPL085W NTG2Q08214 380 aa2.28□□□□□ -2.04
SEC16YPL085W SPC97P38863 823 aa2.28□□□□□ -2.04
SEC16YPL085W YML037CQ03703 340 aa2.28□□□□□ -2.04
SEC16YPL085W YDR338CQ05497 695 aa2.28□□□□□ -2.04
SEC16YPL085W YDR344CQ05510 147 aa2.28□□□□□ -2.04
SEC16YPL085W CYK3Q07533 885 aa2.28□□□□□ -2.04
SEC16YPL085W NOB1Q08444 459 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W ACF2Q12168 779 aa2.28□□□□□ -2.04
SEC16YPL085W GAL80P04387 435 aa2.28□□□□□ -2.04
SEC16YPL085W SPS4P09937 338 aa2.28□□□□□ -2.04
SEC16YPL085W CLB1P24868 471 aa2.28□□□□□ -2.04
SEC16YPL085W HEM3P28789 327 aa2.28□□□□□ -2.04
SEC16YPL085W GCG1P32656 232 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W PHO11P35842 467 aa2.28□□□□□ -2.04
SEC16YPL085W GRS1P38088 690 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W PHO12P38693 467 aa2.28□□□□□ -2.04
SEC16YPL085W APE4P38821 490 aa2.28□□□□□ -2.04
SEC16YPL085W LAM1P38851 1228 aa2.28□□□□□ -2.04
SEC16YPL085W YHR202WP38887 602 aa2.28□□□□□ -2.04
SEC16YPL085W HOS4P40480 1083 aa2.28□□□□□ -2.04
SEC16YPL085W MIG2P53035 382 aa2.28□□□□□ -2.04
SEC16YPL085W MPC1P53157 130 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W RNH70P53331 553 aa2.28□□□□□ -2.04
SEC16YPL085W ALG11P53954 548 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W UTP21Q06078 939 aaPredicted RBP2.28□□□□□ -2.04
SEC16YPL085W UTP4Q06679 776 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W CDC73Q06697 393 aa2.28□□□□□ -2.04
SEC16YPL085W ZRT2Q12436 422 aa2.28□□□□□ -2.04
SEC16YPL085W CMR1Q12510 522 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms