RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	RPS9B	P05755	195 aa	Known RBP	4.27	□□□□□ -1.73
TPM1	YNL079C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
TPM1	YNL079C	PRP22	P24384	1145 aa	Known RBP	4.27	□□□□□ -1.73
TPM1	YNL079C	FEN2	P25621	512 aa	Known RBP	4.27	□□□□□ -1.73
TPM1	YNL079C	PHO11	P35842	467 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	PHO12	P38693	467 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	YHL017W	P38745	532 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	EMP65	P40085	556 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	TAF4	P50105	388 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	NSE5	Q03718	556 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	PPN1	Q04119	674 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	YFT2	Q06676	274 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	YDL144C	Q07589	356 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	CDC45	Q08032	650 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	ACF2	Q12168	779 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	PNS1	Q12412	539 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	USO1	P25386	1790 aa		4.27	□□□□□ -1.73
TPM1	YNL079C	ADE6	P38972	1358 aa	Known RBP	4.27	□□□□□ -1.73
TPM1	YNL079C	SNF2	P22082	1703 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	HCA4	P20448	770 aa	Known RBP	4.26	□□□□□ -1.73
TPM1	YNL079C	SEC15	P22224	910 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	PRP28	P23394	588 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	PRE4	P30657	266 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	DGR2	P32330	852 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	HXT4	P32467	576 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	COS111	P38308	924 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	PIG2	P40187	538 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	YIL077C	P40508	320 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	ENP2	P48234	707 aa	Known RBP	4.26	□□□□□ -1.73
TPM1	YNL079C	STB4	P50104	949 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	PEX8	P53248	589 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	NGL1	Q08213	363 aa	Known RBP	4.26	□□□□□ -1.73
TPM1	YNL079C	MLH3	Q12083	715 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	CHS5	Q12114	671 aa	Known RBP	4.26	□□□□□ -1.73
TPM1	YNL079C	CLF1	Q12309	687 aa	Predicted RBP	4.26	□□□□□ -1.73
TPM1	YNL079C	AUS1	Q08409	1394 aa		4.26	□□□□□ -1.73
TPM1	YNL079C	KAR1	P11927	433 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	MOH1	P38191	138 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	SRP68	P38687	599 aa	Known RBP	4.25	□□□□□ -1.73
TPM1	YNL079C	PCL5	P38794	229 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	RFX1	P48743	811 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	RRP46	P53256	223 aa	Predicted RBP	4.25	□□□□□ -1.73
TPM1	YNL079C	TGL2	P54857	326 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	SSL2	Q00578	843 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	SND1	Q04007	877 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	ECM38	Q05902	660 aa	Predicted RBP	4.25	□□□□□ -1.73
TPM1	YNL079C	PEX15	Q08215	383 aa		4.25	□□□□□ -1.73
TPM1	YNL079C	RVB2	Q12464	471 aa	Known RBP	4.25	□□□□□ -1.73
TPM1	YNL079C	THR1	P17423	357 aa	Known RBP	4.24	□□□□□ -1.73
TPM1	YNL079C	MSS1	P32559	526 aa	Predicted RBP	4.24	□□□□□ -1.73
TPM1	YNL079C	OAR1	P35731	278 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	GRX7	P38068	203 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	RTR1	P40084	226 aa	Predicted RBP	4.24	□□□□□ -1.73
TPM1	YNL079C	PRM2	P40534	656 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	IRC5	P43610	853 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	MPP10	P47083	593 aa	Known RBP	4.24	□□□□□ -1.73
TPM1	YNL079C	SPO1	P53541	631 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	YNL034W	P53963	612 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	YNL018C	P53976	612 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	TIM44	Q01852	431 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	PHM6	Q05637	104 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	HIM1	Q06674	414 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	MCH5	Q08777	521 aa		4.24	□□□□□ -1.73
TPM1	YNL079C	RPS24A	P0CX31	135 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	RPS24B	P0CX32	135 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	SUI2	P20459	304 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	MTC7	P32633	139 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	CDS1	P38221	457 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	CBR1	P38626	284 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	YHR033W	P38690	423 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	PEA2	P40091	420 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	MPS3	P47069	682 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	YRB30	P53107	440 aa	Predicted RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	PAP2	P53632	584 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	SMX3	P54999	86 aa	Predicted RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	CWC2	Q12046	339 aa	Predicted RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	SLX4	Q12098	748 aa		4.23	□□□□□ -1.73
TPM1	YNL079C	TMA7	Q3E764	64 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	RPO41	P13433	1351 aa	Known RBP	4.23	□□□□□ -1.73
TPM1	YNL079C	YEL076C-A	P0CX16	216 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	YLR464W	P0CX17	216 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	UBS1	P38290	277 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	CRG1	P38892	291 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
TPM1	YNL079C	YEL076C	P39971	216 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	EAF5	P39995	279 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	FTR1	P40088	404 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	KHA1	P40309	873 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	HBT1	Q07653	1046 aa	Known RBP	4.22	□□□□□ -1.73
TPM1	YNL079C	USV1	Q12132	391 aa		4.22	□□□□□ -1.73
TPM1	YNL079C	PRD1	P25375	712 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	SET3	P36124	751 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	CTP1	P38152	299 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	FUN12	P39730	1002 aa	Known RBP	4.21	□□□□□ -1.74
TPM1	YNL079C	NDC80	P40460	691 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	SDS3	P40505	327 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	HOL1	P53389	586 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	ATG4	P53867	494 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	MTD1	Q02046	320 aa	Known RBP	4.21	□□□□□ -1.74
TPM1	YNL079C	FDC1	Q03034	503 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	TMN2	Q04562	672 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms