RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	GIP4	P39732	760 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	PAC1	P39946	494 aa	Known RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	YEL075C	P39972	122 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	UFE1	P41834	346 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-JR2	P47099	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-DR1	Q03856	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	ARO80	Q04052	950 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	SPG3	Q04398	127 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-ML1	Q04706	440 aa	Known RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	DIS3	Q08162	1001 aa	Known RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-BR	Q12217	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-NL2	Q12470	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-GR2	Q12485	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	PPR1	P07272	904 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	CYC8	P14922	966 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	SEC2	P17065	759 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	CAP1	P28495	268 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	TCD2	P36101	447 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	ADE17	P38009	592 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	ECM13	P38195	257 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	YBR053C	P38235	358 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	CBR1	P38626	284 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	NPR3	P38742	1146 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
ATM1	YMR301C	HFM1	P51979	1187 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	YNL144C	P53907	740 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	GFD1	Q04839	188 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	SWI5	P08153	709 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	MSF1	P08425	469 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	FPR1	P20081	114 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	RPB10	P22139	70 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	TOA1	P32773	286 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	SMC1	P32908	1225 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	HSP78	P33416	811 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	YMC2	P38087	329 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	PSY4	P38193	441 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	EFM2	P38347	419 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	HEM14	P40012	539 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	VEL1	P53058	206 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	HAP5	Q02516	242 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	YPL014W	Q02606	381 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	YML082W	Q04533	649 aa	Known RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	YCG1	Q06680	1035 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	CWC2	Q12046	339 aa	Predicted RBP	4.93	□□□□□ -1.62
ATM1	YMR301C	FMP27	Q06179	2628 aa		4.93	□□□□□ -1.62
ATM1	YMR301C	JIP3	O13555	125 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	YER152C	P10356	443 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	UTR2	P32623	467 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	GYP6	P32806	458 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	GIP1	P38229	639 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	TIF11	P38912	153 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	MNN1	P39106	762 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	PSY2	P40164	858 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	PRK1	P40494	810 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	DJP1	P40564	432 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	RRN7	P40992	514 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	SUT1	P53032	299 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	YNR065C	P53751	1116 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	TMA16	Q08687	178 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	RPP2B	P02400	110 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	MRP4	P32902	394 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	SGE1	P33335	543 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	MIP6	P38760	659 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	RRM3	P38766	723 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	RVS167	P39743	482 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	STU2	P46675	888 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	RTN1	Q04947	295 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	TAF9	Q05027	157 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	ETT1	Q08421	412 aa	Known RBP	4.92	□□□□□ -1.62
ATM1	YMR301C	EMP46	Q12396	444 aa		4.92	□□□□□ -1.62
ATM1	YMR301C	CCP1	P00431	361 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	CDC33	P07260	213 aa	Known RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	CUP1-1	P0CX80	61 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	CUP1-2	P0CX81	61 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	NIP100	P33420	868 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	DEF1	P35732	738 aa	Known RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	VPS24	P36095	224 aa	Known RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	TRZ1	P36159	838 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	QNS1	P38795	714 aa	Known RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	SPT8	P38915	602 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	GDH3	P39708	457 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	UBP7	P40453	1071 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	PHO86	P46956	311 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	TRM112	P53738	135 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	ECM38	Q05902	660 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	BUD20	Q08004	166 aa	Predicted RBP	4.91	□□□□□ -1.62
ATM1	YMR301C	SIL1	Q08199	421 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	APC5	Q08683	685 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	ARP7	Q12406	477 aa		4.91	□□□□□ -1.62
ATM1	YMR301C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
ATM1	YMR301C	PRT1	P06103	763 aa	Known RBP	4.9	□□□□□ -1.62
ATM1	YMR301C	HSF1	P10961	833 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	AEP2	P22136	580 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	SPT16	P32558	1035 aa	Known RBP	4.9	□□□□□ -1.62
ATM1	YMR301C	SEC61	P32915	480 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	MRPS18	P42847	217 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	PUS2	P53167	370 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	RSC1	P53236	928 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	ESBP6	P53918	673 aa		4.9	□□□□□ -1.62
ATM1	YMR301C	SMA1	Q02651	245 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms