RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C SRP68P38687 599 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C FMO1P38866 432 aa2.58□□□□□ -2
SOK2YMR016C BDH2P39713 417 aa2.58□□□□□ -2
SOK2YMR016C YEL076CP39971 216 aa2.58□□□□□ -2
SOK2YMR016C YIL092WP40497 633 aa2.58□□□□□ -2
SOK2YMR016C NOP2P40991 618 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C CCT7P42943 550 aaKnown RBP2.58□□□□□ -2
SOK2YMR016C TRM732Q03496 1420 aa2.57□□□□□ -2
SOK2YMR016C YEF3P16521 1044 aaKnown RBP2.57□□□□□ -2
SOK2YMR016C NCP1P16603 691 aaKnown RBP2.57□□□□□ -2
SOK2YMR016C ECM1P39715 212 aa2.57□□□□□ -2
SOK2YMR016C FTR1P40088 404 aa2.57□□□□□ -2
SOK2YMR016C CTR1P49573 406 aa2.57□□□□□ -2
SOK2YMR016C ARC35P53731 342 aaKnown RBP2.57□□□□□ -2
SOK2YMR016C GAD1Q04792 585 aa2.57□□□□□ -2
SOK2YMR016C MCM21Q06675 368 aa2.57□□□□□ -2
SOK2YMR016C SIR3P06701 978 aa2.57□□□□□ -2
SOK2YMR016C KAR1P11927 433 aa2.57□□□□□ -2
SOK2YMR016C HOM2P13663 365 aaKnown RBP2.57□□□□□ -2
SOK2YMR016C ARG1P22768 420 aa2.57□□□□□ -2
SOK2YMR016C PET127P32606 800 aa2.57□□□□□ -2
SOK2YMR016C APN2P38207 520 aa2.57□□□□□ -2
SOK2YMR016C EHT1P38295 451 aa2.57□□□□□ -2
SOK2YMR016C SWD1P39706 426 aa2.57□□□□□ -2
SOK2YMR016C MAD3P47074 515 aa2.57□□□□□ -2
SOK2YMR016C RRT6P53117 311 aaPredicted RBP2.57□□□□□ -2
SOK2YMR016C TIM50Q02776 476 aa2.57□□□□□ -2
SOK2YMR016C ESP1Q03018 1630 aa2.57□□□□□ -2
SOK2YMR016C VPS34P22543 875 aa2.56□□□□□ -2
SOK2YMR016C FRD1P32614 470 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C CCT3P39077 534 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C ACA1P39970 489 aa2.56□□□□□ -2
SOK2YMR016C SCS2P40075 244 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C PRM2P40534 656 aa2.56□□□□□ -2
SOK2YMR016C PEF1P53238 335 aa2.56□□□□□ -2
SOK2YMR016C YMR210WQ03649 449 aa2.56□□□□□ -2
SOK2YMR016C TRS130Q03660 1102 aa2.56□□□□□ -2
SOK2YMR016C RIM13Q03792 727 aa2.56□□□□□ -2
SOK2YMR016C VHS3Q08438 674 aa2.56□□□□□ -2
SOK2YMR016C NUR1Q12066 484 aa2.56□□□□□ -2
SOK2YMR016C NYV1Q12255 253 aa2.56□□□□□ -2
SOK2YMR016C DBP10Q12389 995 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C YKL033W-AQ86ZR7 236 aa2.56□□□□□ -2
SOK2YMR016C YPK9Q12697 1472 aa2.56□□□□□ -2
SOK2YMR016C TUP1P16649 713 aa2.56□□□□□ -2
SOK2YMR016C SEC18P18759 758 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C PET309P32522 965 aaPredicted RBP2.56□□□□□ -2
SOK2YMR016C EMP70P32802 667 aa2.56□□□□□ -2
SOK2YMR016C STL1P39932 569 aa2.56□□□□□ -2
SOK2YMR016C PAC2P39937 518 aa2.56□□□□□ -2
SOK2YMR016C LTP1P40347 161 aa2.56□□□□□ -2
SOK2YMR016C RNR4P49723 345 aaKnown RBP2.56□□□□□ -2
SOK2YMR016C MRK1P50873 501 aa2.56□□□□□ -2
SOK2YMR016C ARR3Q06598 404 aa2.56□□□□□ -2
SOK2YMR016C DNF3Q12674 1656 aa2.55□□□□□ -2
SOK2YMR016C PHO3P24031 467 aa2.55□□□□□ -2
SOK2YMR016C STT3P39007 718 aaKnown RBP2.55□□□□□ -2
SOK2YMR016C EMP65P40085 556 aa2.55□□□□□ -2
SOK2YMR016C ASK10P48361 1146 aa2.55□□□□□ -2
SOK2YMR016C TAF4P50105 388 aa2.55□□□□□ -2
SOK2YMR016C CPR6P53691 371 aaKnown RBP2.55□□□□□ -2
SOK2YMR016C YDL121CQ07541 149 aa2.55□□□□□ -2
SOK2YMR016C SLK19Q08581 821 aaKnown RBP2.55□□□□□ -2
SOK2YMR016C VPS15P22219 1454 aa2.55□□□□□ -2
SOK2YMR016C URA3P03962 267 aa2.54□□□□□ -2
SOK2YMR016C PTP1P25044 335 aa2.54□□□□□ -2
SOK2YMR016C DUN1P39009 513 aa2.54□□□□□ -2
SOK2YMR016C GAT1P43574 510 aa2.54□□□□□ -2
SOK2YMR016C YBP2P53169 641 aa2.54□□□□□ -2
SOK2YMR016C ECM16Q04217 1267 aaKnown RBP2.54□□□□□ -2
SOK2YMR016C MLH3Q12083 715 aa2.54□□□□□ -2
SOK2YMR016C PEX1P24004 1043 aa2.54□□□□□ -2
SOK2YMR016C BCS1P32839 456 aa2.54□□□□□ -2
SOK2YMR016C YBR138CP38277 524 aa2.54□□□□□ -2
SOK2YMR016C VID27P40157 782 aa2.54□□□□□ -2
SOK2YMR016C RFX1P48743 811 aa2.54□□□□□ -2
SOK2YMR016C SCS3P53012 380 aa2.54□□□□□ -2
SOK2YMR016C ATG4P53867 494 aa2.54□□□□□ -2
SOK2YMR016C TEP1P53916 434 aa2.54□□□□□ -2
SOK2YMR016C GPD1Q00055 391 aaKnown RBP2.54□□□□□ -2
SOK2YMR016C REC102Q02721 264 aa2.54□□□□□ -2
SOK2YMR016C NSE5Q03718 556 aa2.54□□□□□ -2
SOK2YMR016C ARP7Q12406 477 aa2.54□□□□□ -2
SOK2YMR016C TRM3Q07527 1436 aa2.54□□□□□ -2
SOK2YMR016C HMG2P12684 1045 aa2.53□□□□□ -2
SOK2YMR016C SWI4P25302 1093 aaKnown RBP2.53□□□□□ -2
SOK2YMR016C YUR1P26725 428 aa2.53□□□□□ -2
SOK2YMR016C YKL133CP36066 463 aa2.53□□□□□ -2
SOK2YMR016C SET3P36124 751 aa2.53□□□□□ -2
SOK2YMR016C NUP60P39705 539 aa2.53□□□□□ -2
SOK2YMR016C PUG1P40100 303 aa2.53□□□□□ -2
SOK2YMR016C FHN1P53279 174 aa2.53□□□□□ -2
SOK2YMR016C SNF12P53628 566 aa2.53□□□□□ -2
SOK2YMR016C ACS1Q01574 713 aa2.53□□□□□ -2
SOK2YMR016C YML131WQ03102 365 aa2.53□□□□□ -2
SOK2YMR016C YFT2Q06676 274 aa2.53□□□□□ -2
SOK2YMR016C CLF1Q12309 687 aaPredicted RBP2.53□□□□□ -2
SOK2YMR016C POM34Q12445 299 aa2.53□□□□□ -2
SOK2YMR016C CHD1P32657 1468 aa2.53□□□□□ -2
SOK2YMR016C CHC1P22137 1653 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms