RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W WAR1Q03631 944 aa1.8□□□□□ -2.12
PRP39YML046W MLH2Q07980 695 aa1.8□□□□□ -2.12
PRP39YML046W PRP16P15938 1071 aaPredicted RBP1.79□□□□□ -2.12
PRP39YML046W BRN1P38170 754 aa1.79□□□□□ -2.12
PRP39YML046W CAF16P43569 289 aa1.79□□□□□ -2.12
PRP39YML046W GPD1Q00055 391 aaKnown RBP1.79□□□□□ -2.12
PRP39YML046W FLC1Q08967 793 aa1.79□□□□□ -2.12
PRP39YML046W PPZ1P26570 692 aa1.78□□□□□ -2.12
PRP39YML046W SCO2P38072 301 aa1.78□□□□□ -2.12
PRP39YML046W YJR039WP47107 1121 aa1.78□□□□□ -2.12
PRP39YML046W SPO1P53541 631 aa1.78□□□□□ -2.12
PRP39YML046W RPS15Q01855 142 aaKnown RBP1.78□□□□□ -2.12
PRP39YML046W CAN1P04817 590 aa1.77□□□□□ -2.13
PRP39YML046W MNN4P36044 1178 aa1.77□□□□□ -2.13
PRP39YML046W YHR020WP38708 688 aaKnown RBP1.77□□□□□ -2.13
PRP39YML046W SAP4P53036 818 aa1.77□□□□□ -2.13
PRP39YML046W FDC1Q03034 503 aa1.77□□□□□ -2.13
PRP39YML046W LSB5P25369 354 aa1.77□□□□□ -2.13
PRP39YML046W YGR054WP53235 642 aaKnown RBP1.77□□□□□ -2.13
PRP39YML046W HRD3Q05787 833 aa1.77□□□□□ -2.13
PRP39YML046W HOG1P32485 435 aa1.76□□□□□ -2.13
PRP39YML046W DHR2P36009 735 aaPredicted RBP1.76□□□□□ -2.13
PRP39YML046W TOM71P38825 639 aaKnown RBP1.76□□□□□ -2.13
PRP39YML046W DOT6P40059 670 aaKnown RBP1.76□□□□□ -2.13
PRP39YML046W RCR2Q03446 210 aaKnown RBP1.76□□□□□ -2.13
PRP39YML046W RSA1Q08932 381 aa1.76□□□□□ -2.13
PRP39YML046W PCL8Q08966 492 aa1.76□□□□□ -2.13
PRP39YML046W IMG2P25642 146 aaPredicted RBP1.75□□□□□ -2.13
PRP39YML046W AZF1P41696 914 aa1.75□□□□□ -2.13
PRP39YML046W VTC3Q02725 835 aa1.75□□□□□ -2.13
PRP39YML046W GAL11P19659 1081 aa1.75□□□□□ -2.13
PRP39YML046W SAN1P22470 610 aa1.75□□□□□ -2.13
PRP39YML046W YJU2P28320 278 aaPredicted RBP1.75□□□□□ -2.13
PRP39YML046W NUG1P40010 520 aaKnown RBP1.75□□□□□ -2.13
PRP39YML046W TIM50Q02776 476 aa1.75□□□□□ -2.13
PRP39YML046W CET1O13297 549 aaPredicted RBP1.74□□□□□ -2.13
PRP39YML046W CDC9P04819 755 aa1.74□□□□□ -2.13
PRP39YML046W REV1P12689 985 aa1.74□□□□□ -2.13
PRP39YML046W HOP1P20050 605 aa1.74□□□□□ -2.13
PRP39YML046W GDH3P39708 457 aa1.74□□□□□ -2.13
PRP39YML046W SNU56Q03782 492 aaKnown RBP1.74□□□□□ -2.13
PRP39YML046W CYK3Q07533 885 aa1.74□□□□□ -2.13
PRP39YML046W AHA1Q12449 350 aaKnown RBP1.74□□□□□ -2.13
PRP39YML046W CCL1P37366 393 aa1.73□□□□□ -2.13
PRP39YML046W PXA1P41909 870 aa1.73□□□□□ -2.13
PRP39YML046W IMP4P53941 290 aaKnown RBP1.73□□□□□ -2.13
PRP39YML046W DCS2Q12123 353 aa1.73□□□□□ -2.13
PRP39YML046W TIP41Q12199 356 aa1.73□□□□□ -2.13
PRP39YML046W GAL4P04386 881 aa1.73□□□□□ -2.13
PRP39YML046W YKR075CP36155 307 aa1.73□□□□□ -2.13
PRP39YML046W YPT10P38146 199 aa1.73□□□□□ -2.13
PRP39YML046W ROK1P45818 564 aaPredicted RBP1.73□□□□□ -2.13
PRP39YML046W BET4Q00618 327 aa1.73□□□□□ -2.13
PRP39YML046W PNO1Q99216 274 aaKnown RBP1.73□□□□□ -2.13
PRP39YML046W CAP1P28495 268 aaKnown RBP1.72□□□□□ -2.13
PRP39YML046W MNN1P39106 762 aa1.72□□□□□ -2.13
PRP39YML046W BUD8P41698 603 aa1.72□□□□□ -2.13
PRP39YML046W PPN1Q04119 674 aa1.72□□□□□ -2.13
PRP39YML046W HLR1Q04429 423 aa1.72□□□□□ -2.13
PRP39YML046W ILS1P09436 1072 aaKnown RBP1.71□□□□□ -2.14
PRP39YML046W IME1P21190 360 aa1.71□□□□□ -2.14
PRP39YML046W FTH1P38310 465 aa1.71□□□□□ -2.14
PRP39YML046W BEM4P39011 633 aa1.71□□□□□ -2.14
PRP39YML046W YEL025CP39991 1188 aa1.71□□□□□ -2.14
PRP39YML046W YMR210WQ03649 449 aa1.71□□□□□ -2.14
PRP39YML046W YLR281CQ05863 155 aa1.71□□□□□ -2.14
PRP39YML046W YFL068WP0CX99 160 aa1.71□□□□□ -2.14
PRP39YML046W YLL066W-AP0CY00 160 aa1.71□□□□□ -2.14
PRP39YML046W YLL067W-AP0CY01 160 aa1.71□□□□□ -2.14
PRP39YML046W YKU70P32807 602 aa1.71□□□□□ -2.14
PRP39YML046W RKM3P38222 552 aa1.71□□□□□ -2.14
PRP39YML046W DIG1Q03063 452 aaKnown RBP1.71□□□□□ -2.14
PRP39YML046W ADD37Q03233 198 aa1.71□□□□□ -2.14
PRP39YML046W STP4Q07351 490 aa1.71□□□□□ -2.14
PRP39YML046W BSC6Q08280 497 aa1.71□□□□□ -2.14
PRP39YML046W YER175W-AQ8TGU4 54 aa1.71□□□□□ -2.14
PRP39YML046W GSY1P23337 708 aa1.7□□□□□ -2.14
PRP39YML046W TIF3P34167 436 aaKnown RBP1.7□□□□□ -2.14
PRP39YML046W PCA1P38360 1216 aa1.7□□□□□ -2.14
PRP39YML046W IMD2P38697 523 aaKnown RBP1.7□□□□□ -2.14
PRP39YML046W CRG1P38892 291 aaRIP-Chip data1.7□□□□□ -2.14not detected
PRP39YML046W FTR1P40088 404 aa1.7□□□□□ -2.14
PRP39YML046W YJL049WP47048 450 aa1.7□□□□□ -2.14
PRP39YML046W IMD3P50095 523 aaKnown RBP1.7□□□□□ -2.14
PRP39YML046W SHE10P53075 577 aa1.7□□□□□ -2.14
PRP39YML046W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
PRP39YML046W GET3Q12154 354 aaKnown RBP1.7□□□□□ -2.14
PRP39YML046W MAL11P53048 616 aa1.69□□□□□ -2.14
PRP39YML046W YNL058CP53947 316 aa1.69□□□□□ -2.14
PRP39YML046W USA1Q03714 838 aa1.69□□□□□ -2.14
PRP39YML046W AAC1P04710 309 aa1.69□□□□□ -2.14
PRP39YML046W YND1P40009 630 aa1.69□□□□□ -2.14
PRP39YML046W CIN1P40987 1014 aa1.69□□□□□ -2.14
PRP39YML046W YPT11P48559 417 aa1.69□□□□□ -2.14
PRP39YML046W YLR407WQ06070 228 aa1.69□□□□□ -2.14
PRP39YML046W YLR352WQ06479 807 aa1.69□□□□□ -2.14
PRP39YML046W MDM12Q92328 271 aa1.69□□□□□ -2.14
PRP39YML046W SRD1P09007 221 aa1.68□□□□□ -2.14
PRP39YML046W MAK32P23060 363 aa1.68□□□□□ -2.14
PRP39YML046W PRE4P30657 266 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms