RNA–Protein interactions for RNA: YLR420W

URA4, Transcript of Dihydroorotase, yeast

Gene URA4, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA4	YLR420W	PAF1	P38351	445 aa		5.22	□□□□□ -1.57
URA4	YLR420W	HXT6	P39003	570 aa	Known RBP	5.22	□□□□□ -1.57
URA4	YLR420W	HXT7	P39004	570 aa		5.22	□□□□□ -1.57
URA4	YLR420W	GPP1	P41277	250 aa	Known RBP	5.22	□□□□□ -1.57
URA4	YLR420W	DIP5	P53388	608 aa		5.22	□□□□□ -1.57
URA4	YLR420W	SPO1	P53541	631 aa		5.22	□□□□□ -1.57
URA4	YLR420W	SUT2	Q12286	268 aa		5.22	□□□□□ -1.57
URA4	YLR420W	RAV1	P47104	1357 aa		5.21	□□□□□ -1.58
URA4	YLR420W	GLN4	P13188	809 aa	Known RBP	5.21	□□□□□ -1.58
URA4	YLR420W	ILV6	P25605	309 aa	Known RBP	5.21	□□□□□ -1.58
URA4	YLR420W	OAF3	P36023	863 aa		5.21	□□□□□ -1.58
URA4	YLR420W	UBS1	P38290	277 aa		5.21	□□□□□ -1.58
URA4	YLR420W	YEL020C	P39994	560 aa		5.21	□□□□□ -1.58
URA4	YLR420W	BUD8	P41698	603 aa		5.21	□□□□□ -1.58
URA4	YLR420W	TAF4	P50105	388 aa		5.21	□□□□□ -1.58
URA4	YLR420W	GPG1	P53130	126 aa		5.21	□□□□□ -1.58
URA4	YLR420W	LGE1	Q02796	332 aa	Known RBP	5.21	□□□□□ -1.58
URA4	YLR420W	TUB1	P09733	447 aa	Known RBP	5.2	□□□□□ -1.58
URA4	YLR420W	RPA135	P22138	1203 aa	Known RBP	5.2	□□□□□ -1.58
URA4	YLR420W	YPT7	P32939	208 aa		5.2	□□□□□ -1.58
URA4	YLR420W	ELF1	P36053	145 aa		5.2	□□□□□ -1.58
URA4	YLR420W	YHR033W	P38690	423 aa		5.2	□□□□□ -1.58
URA4	YLR420W	RIX1	P38883	763 aa	Predicted RBP	5.2	□□□□□ -1.58
URA4	YLR420W	ATF1	P40353	525 aa		5.2	□□□□□ -1.58
URA4	YLR420W	RNR4	P49723	345 aa	Known RBP	5.2	□□□□□ -1.58
URA4	YLR420W	STP4	Q07351	490 aa		5.2	□□□□□ -1.58
URA4	YLR420W	BMS1	Q08965	1183 aa	Known RBP	5.2	□□□□□ -1.58
URA4	YLR420W	HFI1	Q12060	488 aa		5.2	□□□□□ -1.58
URA4	YLR420W	MDM20	Q12387	796 aa	Known RBP	5.2	□□□□□ -1.58
URA4	YLR420W	LAM4	P38800	1345 aa		5.2	□□□□□ -1.58
URA4	YLR420W	RTC1	Q08281	1341 aa		5.2	□□□□□ -1.58
URA4	YLR420W	RPS21A	P0C0V8	87 aa	Known RBP	5.19	□□□□□ -1.58
URA4	YLR420W	IME1	P21190	360 aa		5.19	□□□□□ -1.58
URA4	YLR420W	ADY2	P25613	283 aa		5.19	□□□□□ -1.58
URA4	YLR420W	DGR2	P32330	852 aa		5.19	□□□□□ -1.58
URA4	YLR420W	YEN1	P40028	759 aa		5.19	□□□□□ -1.58
URA4	YLR420W	THI6	P41835	540 aa		5.19	□□□□□ -1.58
URA4	YLR420W	ENP2	P48234	707 aa	Known RBP	5.19	□□□□□ -1.58
URA4	YLR420W	NSE5	Q03718	556 aa		5.19	□□□□□ -1.58
URA4	YLR420W	UFO1	Q04511	668 aa		5.19	□□□□□ -1.58
URA4	YLR420W	STE12	P13574	688 aa		5.18	□□□□□ -1.58
URA4	YLR420W	EMP70	P32802	667 aa		5.18	□□□□□ -1.58
URA4	YLR420W	FAT1	P38225	669 aa		5.18	□□□□□ -1.58
URA4	YLR420W	MUP3	P38734	546 aa		5.18	□□□□□ -1.58
URA4	YLR420W	PPE1	P38796	400 aa		5.18	□□□□□ -1.58
URA4	YLR420W	TMN3	P40071	706 aa		5.18	□□□□□ -1.58
URA4	YLR420W	VID28	P40547	921 aa		5.18	□□□□□ -1.58
URA4	YLR420W	PMT6	P42934	759 aa		5.18	□□□□□ -1.58
URA4	YLR420W	IES1	P43579	692 aa		5.18	□□□□□ -1.58
URA4	YLR420W	NGL2	Q03264	515 aa	Known RBP	5.18	□□□□□ -1.58
URA4	YLR420W	RKI1	Q12189	258 aa		5.18	□□□□□ -1.58
URA4	YLR420W	RMP1	Q12530	201 aa		5.18	□□□□□ -1.58
URA4	YLR420W	DAK1	P54838	584 aa	Known RBP	5.17	□□□□□ -1.58
URA4	YLR420W	YML122C	Q03207	126 aa		5.17	□□□□□ -1.58
URA4	YLR420W	ARO10	Q06408	635 aa		5.17	□□□□□ -1.58
URA4	YLR420W	AIM41	Q12032	185 aa		5.17	□□□□□ -1.58
URA4	YLR420W	YPR027C	Q12079	277 aa		5.17	□□□□□ -1.58
URA4	YLR420W	APM4	Q99186	491 aa		5.17	□□□□□ -1.58
URA4	YLR420W	PRE4	P30657	266 aa		5.16	□□□□□ -1.58
URA4	YLR420W	UBP12	P39538	1254 aa		5.16	□□□□□ -1.58
URA4	YLR420W	PEA2	P40091	420 aa		5.16	□□□□□ -1.58
URA4	YLR420W	IZH3	Q07959	543 aa		5.16	□□□□□ -1.58
URA4	YLR420W	SLK19	Q08581	821 aa	Known RBP	5.16	□□□□□ -1.58
URA4	YLR420W	TRE2	Q08693	809 aa		5.16	□□□□□ -1.58
URA4	YLR420W	TSR4	P25040	408 aa		5.15	□□□□□ -1.59
URA4	YLR420W	MSS1	P32559	526 aa	Predicted RBP	5.15	□□□□□ -1.59
URA4	YLR420W	FDC1	Q03034	503 aa		5.15	□□□□□ -1.59
URA4	YLR420W	USO1	P25386	1790 aa		5.14	□□□□□ -1.59
URA4	YLR420W	YMC2	P38087	329 aa		5.14	□□□□□ -1.59
URA4	YLR420W	CRG1	P38892	291 aa	RIP-Chip data	5.14	□□□□□ -1.59	not detected
URA4	YLR420W	PMC1	P38929	1173 aa	Predicted RBP	5.14	□□□□□ -1.59
URA4	YLR420W	YEL025C	P39991	1188 aa		5.14	□□□□□ -1.59
URA4	YLR420W	DUG1	P43616	481 aa	Known RBP	5.14	□□□□□ -1.59
URA4	YLR420W	ATG36	P46983	293 aa		5.14	□□□□□ -1.59
URA4	YLR420W	SQS1	P53866	767 aa	Known RBP	5.14	□□□□□ -1.59
URA4	YLR420W	CEF1	Q03654	590 aa	Predicted RBP	5.14	□□□□□ -1.59
URA4	YLR420W	TRS23	Q03784	219 aa		5.14	□□□□□ -1.59
URA4	YLR420W	NDJ1	Q12366	352 aa		5.14	□□□□□ -1.59
URA4	YLR420W	RAD9	P14737	1309 aa		5.14	□□□□□ -1.59
URA4	YLR420W	NUP192	P47054	1683 aa		5.14	□□□□□ -1.59
URA4	YLR420W	KRE5	P22023	1365 aa		5.14	□□□□□ -1.59
URA4	YLR420W	BCK1	Q01389	1478 aa		5.13	□□□□□ -1.59
URA4	YLR420W	AEP2	P22136	580 aa		5.13	□□□□□ -1.59
URA4	YLR420W	SAT4	P25333	603 aa	Known RBP	5.13	□□□□□ -1.59
URA4	YLR420W	DAL3	P32459	195 aa		5.13	□□□□□ -1.59
URA4	YLR420W	YPT53	P36019	220 aa		5.13	□□□□□ -1.59
URA4	YLR420W	FTR1	P40088	404 aa		5.13	□□□□□ -1.59
URA4	YLR420W	PRM2	P40534	656 aa		5.13	□□□□□ -1.59
URA4	YLR420W	SPC105	P53148	917 aa		5.13	□□□□□ -1.59
URA4	YLR420W	TIM50	Q02776	476 aa		5.13	□□□□□ -1.59
URA4	YLR420W	MFM1	Q02783	413 aa		5.13	□□□□□ -1.59
URA4	YLR420W	FMP30	Q02883	468 aa		5.13	□□□□□ -1.59
URA4	YLR420W	SKY1	Q03656	742 aa		5.13	□□□□□ -1.59
URA4	YLR420W	YDR179W-A	Q03983	463 aa		5.13	□□□□□ -1.59
URA4	YLR420W	PHO5	P00635	467 aa		5.12	□□□□□ -1.59
URA4	YLR420W	TUP1	P16649	713 aa		5.12	□□□□□ -1.59
URA4	YLR420W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
URA4	YLR420W	EUG1	P32474	517 aa		5.12	□□□□□ -1.59
URA4	YLR420W	DHR2	P36009	735 aa	Predicted RBP	5.12	□□□□□ -1.59
URA4	YLR420W	ESL2	P36168	1195 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms