RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C YLR407WQ06070 228 aa3.82□□□□□ -1.8
PBA1YLR199C PSR1Q07800 427 aa3.82□□□□□ -1.8
PBA1YLR199C VHS3Q08438 674 aa3.82□□□□□ -1.8
PBA1YLR199C THI21Q08975 551 aa3.82□□□□□ -1.8
PBA1YLR199C TRM8Q12009 286 aa3.82□□□□□ -1.8
PBA1YLR199C OSW2Q12202 724 aa3.82□□□□□ -1.8
PBA1YLR199C PHO5P00635 467 aa3.81□□□□□ -1.8
PBA1YLR199C RPS17AP02407 136 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C FUM1P08417 488 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C CDC16P09798 840 aa3.81□□□□□ -1.8
PBA1YLR199C YEL076C-AP0CX16 216 aa3.81□□□□□ -1.8
PBA1YLR199C YLR464WP0CX17 216 aa3.81□□□□□ -1.8
PBA1YLR199C RPS17BP14127 136 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C CBP3P21560 335 aa3.81□□□□□ -1.8
PBA1YLR199C CLB4P24871 460 aa3.81□□□□□ -1.8
PBA1YLR199C ANP1P32629 500 aa3.81□□□□□ -1.8
PBA1YLR199C MTH1P35198 433 aa3.81□□□□□ -1.8
PBA1YLR199C IFA38P38286 347 aa3.81□□□□□ -1.8
PBA1YLR199C STT3P39007 718 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C CAJ1P39101 391 aa3.81□□□□□ -1.8
PBA1YLR199C YEL076CP39971 216 aa3.81□□□□□ -1.8
PBA1YLR199C YER010CP40011 234 aa3.81□□□□□ -1.8
PBA1YLR199C TPA1P40032 644 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C CTF18P49956 741 aa3.81□□□□□ -1.8
PBA1YLR199C YGR016WP53209 190 aa3.81□□□□□ -1.8
PBA1YLR199C YKR011CQ02209 353 aa3.81□□□□□ -1.8
PBA1YLR199C LEE1Q02799 301 aaKnown RBP3.81□□□□□ -1.8
PBA1YLR199C YMR206WQ03695 313 aa3.81□□□□□ -1.8
PBA1YLR199C YCG1Q06680 1035 aa3.81□□□□□ -1.8
PBA1YLR199C XYL2Q07993 356 aa3.81□□□□□ -1.8
PBA1YLR199C RTK1Q12100 620 aaPredicted RBP3.81□□□□□ -1.8
PBA1YLR199C HAL9Q12180 1030 aa3.81□□□□□ -1.8
PBA1YLR199C ERG4P25340 473 aa3.8□□□□□ -1.8
PBA1YLR199C KAR4P25583 335 aa3.8□□□□□ -1.8
PBA1YLR199C MF(ALPHA)2P32435 120 aa3.8□□□□□ -1.8
PBA1YLR199C RPD3P32561 433 aa3.8□□□□□ -1.8
PBA1YLR199C NPL6P32832 435 aa3.8□□□□□ -1.8
PBA1YLR199C TYE7P33122 291 aaPredicted RBP3.8□□□□□ -1.8
PBA1YLR199C AKL1P38080 1108 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C TAF5P38129 798 aa3.8□□□□□ -1.8
PBA1YLR199C ECM21P38167 1117 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C YBR138CP38277 524 aa3.8□□□□□ -1.8
PBA1YLR199C SRP72P38688 640 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C UME6P39001 836 aa3.8□□□□□ -1.8
PBA1YLR199C SSP120P39931 234 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C RPS0BP46654 252 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C YML6P51998 286 aa3.8□□□□□ -1.8
PBA1YLR199C PUS2P53167 370 aa3.8□□□□□ -1.8
PBA1YLR199C MFB1Q04922 465 aa3.8□□□□□ -1.8
PBA1YLR199C UTP21Q06078 939 aaPredicted RBP3.8□□□□□ -1.8
PBA1YLR199C CSR1Q06705 408 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C RVB2Q12464 471 aaKnown RBP3.8□□□□□ -1.8
PBA1YLR199C SMC6Q12749 1114 aa3.8□□□□□ -1.8
PBA1YLR199C SPT7P35177 1332 aa3.79□□□□□ -1.8
PBA1YLR199C CYB2P00175 591 aa3.79□□□□□ -1.8
PBA1YLR199C SPE1P08432 466 aa3.79□□□□□ -1.8
PBA1YLR199C MIS1P09440 975 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C NAT1P12945 854 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C POL3P15436 1097 aa3.79□□□□□ -1.8
PBA1YLR199C ACO1P19414 778 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
PBA1YLR199C SIR1P21691 654 aa3.79□□□□□ -1.8
PBA1YLR199C RPC53P25441 422 aa3.79□□□□□ -1.8
PBA1YLR199C YBR225WP38321 900 aa3.79□□□□□ -1.8
PBA1YLR199C PES4P39684 611 aa3.79□□□□□ -1.8
PBA1YLR199C MAD2P40958 196 aa3.79□□□□□ -1.8
PBA1YLR199C LYS14P40971 790 aa3.79□□□□□ -1.8
PBA1YLR199C ENP2P48234 707 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C RAI1P53063 387 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C YGR012WP53206 393 aa3.79□□□□□ -1.8
PBA1YLR199C GND2P53319 492 aa3.79□□□□□ -1.8
PBA1YLR199C YMR210WQ03649 449 aa3.79□□□□□ -1.8
PBA1YLR199C SNO4Q04902 237 aa3.79□□□□□ -1.8
PBA1YLR199C IWR1Q07532 353 aaPredicted RBP3.79□□□□□ -1.8
PBA1YLR199C HSP33Q08914 237 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C HSP32Q08992 237 aa3.79□□□□□ -1.8
PBA1YLR199C DIN7Q12086 430 aa3.79□□□□□ -1.8
PBA1YLR199C DBP10Q12389 995 aaKnown RBP3.79□□□□□ -1.8
PBA1YLR199C RED1P14291 827 aa3.78□□□□□ -1.8
PBA1YLR199C PFK2P16862 959 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PBA1YLR199C TPM1P17536 199 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C SWI4P25302 1093 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C KRR1P25586 316 aaPredicted RBP3.78□□□□□ -1.8
PBA1YLR199C IMG2P25642 146 aaPredicted RBP3.78□□□□□ -1.8
PBA1YLR199C CBF2P32504 956 aa3.78□□□□□ -1.8
PBA1YLR199C BYE1P36106 594 aa3.78□□□□□ -1.8
PBA1YLR199C SET3P36124 751 aa3.78□□□□□ -1.8
PBA1YLR199C MRPL36P36531 177 aa3.78□□□□□ -1.8
PBA1YLR199C MIP6P38760 659 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C LRP1P38801 184 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C AXL1P40851 1208 aa3.78□□□□□ -1.8
PBA1YLR199C RMD8P43620 662 aa3.78□□□□□ -1.8
PBA1YLR199C MNT2P53059 558 aa3.78□□□□□ -1.8
PBA1YLR199C NCS6P53088 359 aa3.78□□□□□ -1.8
PBA1YLR199C DUS1P53759 423 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C MUK1Q02866 612 aa3.78□□□□□ -1.8
PBA1YLR199C YPS7Q06325 596 aa3.78□□□□□ -1.8
PBA1YLR199C AFT2Q08957 416 aa3.78□□□□□ -1.8
PBA1YLR199C HSL1P34244 1518 aa3.78□□□□□ -1.8
PBA1YLR199C GEA2P39993 1459 aaKnown RBP3.78□□□□□ -1.8
PBA1YLR199C CKA1P15790 372 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms