RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	HXT13	P39924	564 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	GDI1	P39958	451 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	CIR1	P42940	261 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	EPL1	P43572	832 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	ALT1	P52893	592 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	SLD3	P53135	668 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	YGR266W	P53326	701 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	ARE2	P53629	642 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	HXT17	P53631	564 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	CNM67	P53865	581 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	TEP1	P53916	434 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	SIW14	P53965	281 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	RCM1	P53972	490 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	HXT15	P54854	567 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	PNG1	Q02890	363 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	SNZ1	Q03148	297 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	RMT2	Q03305	412 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	RKM2	Q03942	479 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	RSA3	Q05942	220 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	PEX15	Q08215	383 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	MED7	Q08278	222 aa		4.22	□□□□□ -1.73
PAM18	YLR008C	RVB2	Q12464	471 aa	Known RBP	4.22	□□□□□ -1.73
PAM18	YLR008C	SEC7	P11075	2009 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	CPA2	P03965	1118 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PAM18	YLR008C	ARG3	P05150	338 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	CTT1	P06115	562 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	SNF1	P06782	633 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	MSD1	P15179	658 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PAM18	YLR008C	ROX1	P25042	368 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	NTG1	P31378	399 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	SSE1	P32589	693 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	YEL1	P34225	687 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	UIP5	P36137	443 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	LAS1	P36146	502 aa	Predicted RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	TAF5	P38129	798 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YBL028C	P38202	106 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	TOS1	P38288	455 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	PCM1	P38628	557 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	SPT8	P38915	602 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	DUN1	P39009	513 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	NPR2	P39923	615 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	STL1	P39932	569 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	EMP65	P40085	556 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	UBP7	P40453	1071 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	SMK1	P41808	388 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	CCT7	P42943	550 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	HOP2	P53187	214 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	LSB1	P53281	241 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YNR068C	P53754	272 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YNL247W	P53852	767 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	EAF7	P53911	425 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	VPS9	P54787	451 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	CIK1	Q01649	594 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YOR059C	Q08448	450 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	PUS7	Q08647	676 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	PTC5	Q12511	572 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	NUP188	P52593	1655 aa	Known RBP	4.21	□□□□□ -1.74
PAM18	YLR008C	YRF1-1	P0CX20	1796 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YRF1-5	P0CX21	1796 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	YRF1-8	P0CX22	1796 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	DNF2	Q12675	1612 aa		4.21	□□□□□ -1.74
PAM18	YLR008C	SPE2	P21182	396 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	PUP2	P32379	260 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	DOM34	P33309	386 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	LOT5	P34234	306 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	OMA1	P36163	345 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	ALG3	P38179	458 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	DED81	P38707	554 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	QNS1	P38795	714 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	FUN12	P39730	1002 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	ALD5	P40047	520 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	OSW5	P40219	148 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	MKT1	P40850	830 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	LYS14	P40971	790 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	ALG2	P43636	503 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	STU2	P46675	888 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	NOP9	P47077	666 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	VPS4	P52917	437 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	TAD1	P53065	400 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	YNR061C	P53747	219 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	ECM9	Q02202	377 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	YPL107W	Q02873	248 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	SKY1	Q03656	742 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	AIM32	Q04689	311 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	VID22	Q05934	901 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	YPR027C	Q12079	277 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	SFI1	Q12369	946 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	ARP7	Q12406	477 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	PDH1	Q12428	516 aa	Known RBP	4.2	□□□□□ -1.74
PAM18	YLR008C	HAP1	P0CE41	1502 aa		4.2	□□□□□ -1.74
PAM18	YLR008C	DOP1	Q03921	1698 aa		4.19	□□□□□ -1.74
PAM18	YLR008C	YRF1-4	O13559	1382 aa		4.19	□□□□□ -1.74
PAM18	YLR008C	YML133C	Q03099	1374 aa		4.19	□□□□□ -1.74
PAM18	YLR008C	YLL067C	Q07888	1374 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms