RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W PEX1P24004 1043 aa6.91□□□□□ -1.3
NMD5YJR132W PHO3P24031 467 aa6.91□□□□□ -1.3
NMD5YJR132W RRP7P25368 297 aaPredicted RBP6.91□□□□□ -1.3
NMD5YJR132W SUR1P33300 382 aa6.91□□□□□ -1.3
NMD5YJR132W ADE17P38009 592 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W RAI1P53063 387 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W HEF3P53978 1044 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W YPL107WQ02873 248 aa6.91□□□□□ -1.3
NMD5YJR132W GIM5Q04493 163 aa6.91□□□□□ -1.3
NMD5YJR132W MSH5Q12175 901 aa6.91□□□□□ -1.3
NMD5YJR132W ENO1P00924 437 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W RPS24AP0CX31 135 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W RPS24BP0CX32 135 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W MIP1P15801 1254 aa6.91□□□□□ -1.3
NMD5YJR132W PRP2P20095 876 aaPredicted RBP6.91□□□□□ -1.3
NMD5YJR132W DPB2P24482 689 aaPredicted RBP6.91□□□□□ -1.3
NMD5YJR132W RPS7AP26786 190 aaKnown RBP6.91□□□□□ -1.3
NMD5YJR132W HXT1P32465 570 aa6.91□□□□□ -1.3
NMD5YJR132W AFG2P32794 780 aa6.91□□□□□ -1.3
NMD5YJR132W NPL6P32832 435 aa6.91□□□□□ -1.3
NMD5YJR132W PCL6P40038 420 aa6.91□□□□□ -1.3
NMD5YJR132W YJR039WP47107 1121 aa6.91□□□□□ -1.3
NMD5YJR132W YNR061CP53747 219 aa6.91□□□□□ -1.3
NMD5YJR132W MUK1Q02866 612 aa6.91□□□□□ -1.3
NMD5YJR132W YLR345WQ06137 509 aa6.91□□□□□ -1.3
NMD5YJR132W MCM21Q06675 368 aa6.91□□□□□ -1.3
NMD5YJR132W YOS9Q99220 542 aa6.91□□□□□ -1.3
NMD5YJR132W DRS2P39524 1355 aa6.9□□□□□ -1.3
NMD5YJR132W CDC19P00549 500 aaKnown RBP6.9□□□□□ -1.3
NMD5YJR132W SEC63P14906 663 aa6.9□□□□□ -1.3
NMD5YJR132W OSM1P21375 501 aaKnown RBP6.9□□□□□ -1.3
NMD5YJR132W PTP1P25044 335 aa6.9□□□□□ -1.3
NMD5YJR132W KTR1P27810 393 aaKnown RBP6.9□□□□□ -1.3
NMD5YJR132W RAD54P32863 898 aa6.9□□□□□ -1.3
NMD5YJR132W LRG1P35688 1017 aa6.9□□□□□ -1.3
NMD5YJR132W YBL036CP38197 257 aa6.9□□□□□ -1.3
NMD5YJR132W ALG5P40350 334 aa6.9□□□□□ -1.3
NMD5YJR132W RCM1P53972 490 aa6.9□□□□□ -1.3
NMD5YJR132W NUT2Q06213 157 aa6.9□□□□□ -1.3
NMD5YJR132W YPQ2Q06328 317 aa6.9□□□□□ -1.3
NMD5YJR132W UTR1P21373 530 aa6.9□□□□□ -1.3
NMD5YJR132W GIT1P25346 518 aa6.9□□□□□ -1.3
NMD5YJR132W APL1P27351 700 aa6.9□□□□□ -1.3
NMD5YJR132W DBF4P32325 704 aa6.9□□□□□ -1.3
NMD5YJR132W BEM3P32873 1128 aa6.9□□□□□ -1.3
NMD5YJR132W LAS1P36146 502 aaPredicted RBP6.9□□□□□ -1.3
NMD5YJR132W LTP1P40347 161 aa6.9□□□□□ -1.3
NMD5YJR132W YJL068CP40363 299 aa6.9□□□□□ -1.3
NMD5YJR132W CIR1P42940 261 aa6.9□□□□□ -1.3
NMD5YJR132W LOH1P47055 219 aa6.9□□□□□ -1.3
NMD5YJR132W PAN2P53010 1115 aaPredicted RBP6.9□□□□□ -1.3
NMD5YJR132W SPP1Q03012 353 aa6.9□□□□□ -1.3
NMD5YJR132W HER2Q03557 464 aa6.9□□□□□ -1.3
NMD5YJR132W PDS5Q04264 1277 aa6.9□□□□□ -1.3
NMD5YJR132W CDC36P06100 191 aaPredicted RBP6.9□□□□□ -1.31
NMD5YJR132W KIN2P13186 1147 aaKnown RBP6.9□□□□□ -1.31
NMD5YJR132W BAS1P22035 811 aa6.9□□□□□ -1.31
NMD5YJR132W APA2P22108 325 aa6.9□□□□□ -1.31
NMD5YJR132W OCT1P35999 772 aa6.9□□□□□ -1.31
NMD5YJR132W RMA1P36001 430 aaKnown RBP6.9□□□□□ -1.31
NMD5YJR132W ICE2P40499 491 aa6.9□□□□□ -1.31
NMD5YJR132W ERR3P42222 437 aa6.9□□□□□ -1.31
NMD5YJR132W YGR127WP53275 312 aa6.9□□□□□ -1.31
NMD5YJR132W COX20Q04935 205 aa6.9□□□□□ -1.31
NMD5YJR132W ARO10Q06408 635 aa6.9□□□□□ -1.31
NMD5YJR132W SGO1Q08490 590 aa6.9□□□□□ -1.31
NMD5YJR132W SET6Q12529 373 aa6.9□□□□□ -1.31
NMD5YJR132W TRP5P00931 707 aaKnown RBP6.89□□□□□ -1.31
NMD5YJR132W AAC3P18238 307 aa6.89□□□□□ -1.31
NMD5YJR132W SIF2P38262 535 aa6.89□□□□□ -1.31
NMD5YJR132W SDH8P38345 138 aa6.89□□□□□ -1.31
NMD5YJR132W YHR182WP38870 785 aa6.89□□□□□ -1.31
NMD5YJR132W YER184CP39961 794 aa6.89□□□□□ -1.31
NMD5YJR132W CLU1Q03690 1277 aaKnown RBP6.89□□□□□ -1.31
NMD5YJR132W UTP21Q06078 939 aaPredicted RBP6.89□□□□□ -1.31
NMD5YJR132W PIG1Q06216 648 aa6.89□□□□□ -1.31
NMD5YJR132W GYP6P32806 458 aa6.89□□□□□ -1.31
NMD5YJR132W MUD2P36084 527 aaKnown RBP6.89□□□□□ -1.31
NMD5YJR132W TDP1P38319 544 aa6.89□□□□□ -1.31
NMD5YJR132W IRC24P40580 263 aa6.89□□□□□ -1.31
NMD5YJR132W RBL2P48606 106 aaKnown RBP6.89□□□□□ -1.31
NMD5YJR132W ARC35P53731 342 aaKnown RBP6.89□□□□□ -1.31
NMD5YJR132W MAK10Q02197 733 aa6.89□□□□□ -1.31
NMD5YJR132W ESA1Q08649 445 aa6.89□□□□□ -1.31
NMD5YJR132W SPE2P21182 396 aa6.88□□□□□ -1.31
NMD5YJR132W ATO2P32907 282 aa6.88□□□□□ -1.31
NMD5YJR132W KSP1P38691 1029 aaKnown RBP6.88□□□□□ -1.31
NMD5YJR132W IMA5P40884 581 aa6.88□□□□□ -1.31
NMD5YJR132W GUS1P46655 708 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
NMD5YJR132W BPL1P48445 690 aaPredicted RBP6.88□□□□□ -1.31
NMD5YJR132W IMD4P50094 524 aaKnown RBP6.88□□□□□ -1.31
NMD5YJR132W VBA4Q04602 768 aaKnown RBP6.88□□□□□ -1.31
NMD5YJR132W LCB5Q06147 687 aaKnown RBP6.88□□□□□ -1.31
NMD5YJR132W YPR022CQ12139 1133 aa6.88□□□□□ -1.31
NMD5YJR132W PSF3Q12146 194 aa6.88□□□□□ -1.31
NMD5YJR132W NSI1Q12457 570 aa6.88□□□□□ -1.31
NMD5YJR132W PIG2P40187 538 aa6.88□□□□□ -1.31
NMD5YJR132W MNN11P46985 422 aaKnown RBP6.88□□□□□ -1.31
NMD5YJR132W PMT3P47190 753 aa6.88□□□□□ -1.31
NMD5YJR132W HLJ1P48353 224 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms