RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	ERS1	P17261	260 aa		4	□□□□□ -1.77
SGN1	YIR001C	PPH22	P23595	377 aa		4	□□□□□ -1.77
SGN1	YIR001C	GAC1	P28006	793 aa		4	□□□□□ -1.77
SGN1	YIR001C	MET4	P32389	672 aa		4	□□□□□ -1.77
SGN1	YIR001C	TKL2	P33315	681 aa		4	□□□□□ -1.77
SGN1	YIR001C	KDX1	P36005	433 aa		4	□□□□□ -1.77
SGN1	YIR001C	TCD2	P36101	447 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	YKR051W	P36142	418 aa		4	□□□□□ -1.77
SGN1	YIR001C	GGA2	P38817	585 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	SNF7	P39929	240 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	NPP2	P39997	493 aa		4	□□□□□ -1.77
SGN1	YIR001C	IRC24	P40580	263 aa		4	□□□□□ -1.77
SGN1	YIR001C	DAK2	P43550	591 aa		4	□□□□□ -1.77
SGN1	YIR001C	ALT1	P52893	592 aa		4	□□□□□ -1.77
SGN1	YIR001C	YCG1	Q06680	1035 aa		4	□□□□□ -1.77
SGN1	YIR001C	YDL057W	Q07379	328 aa		4	□□□□□ -1.77
SGN1	YIR001C	TSR1	Q07381	788 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	YOR059C	Q08448	450 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	CDC53	Q12018	815 aa	Known RBP	4	□□□□□ -1.77
SGN1	YIR001C	TPK1	P06244	397 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	NAT1	P12945	854 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	DAL7	P21826	554 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	MCM5	P29496	775 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	MUD1	P32605	298 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	FRE1	P32791	686 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	STE5	P32917	917 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	YKL077W	P36081	392 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	AGP2	P38090	596 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	PCF11	P39081	626 aa	Predicted RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	NUP60	P39705	539 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	DOT6	P40059	670 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	KAP123	P40069	1113 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	FTR1	P40088	404 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	DAS1	P47005	663 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	CEG1	Q01159	459 aa	Predicted RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	MTD1	Q02046	320 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	NOG1	Q02892	647 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	CEF1	Q03654	590 aa	Predicted RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	SEG1	Q04279	960 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	GYL1	Q04322	720 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	JIP5	Q06214	492 aa	Predicted RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	BSP1	Q06604	576 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	PSR2	Q07949	397 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	FLC1	Q08967	793 aa		3.99	□□□□□ -1.77
SGN1	YIR001C	POL2	P21951	2222 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	BRR2	P32639	2163 aa	Known RBP	3.99	□□□□□ -1.77
SGN1	YIR001C	EFB1	P32471	206 aa	Known RBP	3.98	□□□□□ -1.77
SGN1	YIR001C	YEL1	P34225	687 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	OMA1	P36163	345 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	YBR225W	P38321	900 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	REI1	P38344	393 aa	Predicted RBP	3.98	□□□□□ -1.77
SGN1	YIR001C	GEM1	P39722	662 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	YIL161W	P40449	235 aa	Known RBP	3.98	□□□□□ -1.77
SGN1	YIR001C	SMC3	P47037	1230 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	TOF2	Q02208	771 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	MUB1	Q03162	620 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	COG8	Q04632	607 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	YPR027C	Q12079	277 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	NSI1	Q12457	570 aa		3.98	□□□□□ -1.77
SGN1	YIR001C	BI4	P03879	638 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	CPA2	P03965	1118 aa	Known RBP	3.97	□□□□□ -1.77
SGN1	YIR001C	CHS1	P08004	1131 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	KIN3	P22209	435 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	URA1	P28272	314 aa	Predicted RBP	3.97	□□□□□ -1.77
SGN1	YIR001C	SWE1	P32944	819 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	XRS2	P33301	854 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	MAL33	P38157	468 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	ATG12	P38316	186 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	YPT35	P38815	214 aa	Known RBP	3.97	□□□□□ -1.77
SGN1	YIR001C	AVT2	P39981	480 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	RSM25	P40496	264 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	MMM1	P41800	426 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	NBP1	P52919	319 aa	Predicted RBP	3.97	□□□□□ -1.77
SGN1	YIR001C	SMA1	Q02651	245 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	DON1	Q05610	365 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	EAF1	Q06337	982 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	MLH2	Q07980	695 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	YPL150W	Q12152	901 aa		3.97	□□□□□ -1.77
SGN1	YIR001C	GAL10	P04397	699 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	HSF1	P10961	833 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	FPR1	P20081	114 aa	Known RBP	3.96	□□□□□ -1.78
SGN1	YIR001C	IME1	P21190	360 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	LRE1	P25579	583 aa	Known RBP	3.96	□□□□□ -1.78
SGN1	YIR001C	CDC15	P27636	974 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	CBF2	P32504	956 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
SGN1	YIR001C	SWI3	P32591	825 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	TFB1	P32776	642 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	YKL023W	P36103	277 aa	Known RBP	3.96	□□□□□ -1.78
SGN1	YIR001C	GDH3	P39708	457 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	OSW5	P40219	148 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	RMD8	P43620	662 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	YJR054W	P47114	497 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	PEX14	P53112	341 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	MON1	P53129	644 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	TIM8	P57744	87 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	ECM22	Q05958	814 aa	Predicted RBP	3.96	□□□□□ -1.78
SGN1	YIR001C	TLG2	Q08144	397 aa		3.96	□□□□□ -1.78
SGN1	YIR001C	ABP140	Q08641	628 aa	Known RBP	3.96	□□□□□ -1.78
SGN1	YIR001C	MED1	Q12321	566 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms