RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C HSL7P38274 827 aa7.91□□□□□ -1.14
SNP1YIL061C NMD3P38861 518 aaKnown RBP7.91□□□□□ -1.14
SNP1YIL061C TAH11P47112 604 aa7.91□□□□□ -1.14
SNP1YIL061C ALT2P52892 507 aa7.91□□□□□ -1.14
SNP1YIL061C NCS6P53088 359 aa7.91□□□□□ -1.14
SNP1YIL061C SUB1P54000 292 aaKnown RBP7.91□□□□□ -1.14
SNP1YIL061C YDR338CQ05497 695 aa7.91□□□□□ -1.14
SNP1YIL061C THI20Q08224 551 aa7.91□□□□□ -1.14
SNP1YIL061C VHS3Q08438 674 aa7.91□□□□□ -1.14
SNP1YIL061C YLL056CQ12177 298 aa7.91□□□□□ -1.14
SNP1YIL061C GAL80P04387 435 aa7.9□□□□□ -1.14
SNP1YIL061C PMR1P13586 950 aa7.9□□□□□ -1.14
SNP1YIL061C CSE2P33308 149 aa7.9□□□□□ -1.14
SNP1YIL061C AIM18P38884 321 aa7.9□□□□□ -1.14
SNP1YIL061C REV7P38927 245 aa7.9□□□□□ -1.14
SNP1YIL061C PRK1P40494 810 aa7.9□□□□□ -1.14
SNP1YIL061C PCL10P53124 433 aa7.9□□□□□ -1.14
SNP1YIL061C PEX31P53203 462 aa7.9□□□□□ -1.14
SNP1YIL061C YPR003CP53394 754 aa7.9□□□□□ -1.14
SNP1YIL061C NMA111P53920 997 aa7.9□□□□□ -1.14
SNP1YIL061C YNL011CP53980 444 aa7.9□□□□□ -1.14
SNP1YIL061C RCR2Q03446 210 aaKnown RBP7.9□□□□□ -1.14
SNP1YIL061C RKM2Q03942 479 aa7.9□□□□□ -1.14
SNP1YIL061C SHE9Q04172 456 aa7.9□□□□□ -1.14
SNP1YIL061C RCL1Q08096 367 aaPredicted RBP7.9□□□□□ -1.14
SNP1YIL061C CUE5Q08412 411 aaKnown RBP7.9□□□□□ -1.14
SNP1YIL061C GPM3Q12326 303 aa7.9□□□□□ -1.14
SNP1YIL061C TEF1P02994 458 aaKnown RBP7.89□□□□□ -1.15
SNP1YIL061C PDB1P32473 366 aaKnown RBP7.89□□□□□ -1.15
SNP1YIL061C RAD5P32849 1169 aaPredicted RBP7.89□□□□□ -1.15
SNP1YIL061C ETR1P38071 380 aa7.89□□□□□ -1.15
SNP1YIL061C RAD55P38953 406 aa7.89□□□□□ -1.15
SNP1YIL061C ECM1P39715 212 aa7.89□□□□□ -1.15
SNP1YIL061C SIP5P40210 489 aaKnown RBP7.89□□□□□ -1.15
SNP1YIL061C ESL1P40456 1118 aa7.89□□□□□ -1.15
SNP1YIL061C TFG1P41895 735 aaPredicted RBP7.89□□□□□ -1.15
SNP1YIL061C RRT5P43607 289 aa7.89□□□□□ -1.15
SNP1YIL061C LIA1P47120 325 aaKnown RBP7.89□□□□□ -1.15
SNP1YIL061C SPC98P53540 846 aa7.89□□□□□ -1.15
SNP1YIL061C ULP1Q02724 621 aa7.89□□□□□ -1.15
SNP1YIL061C SND1Q04007 877 aa7.89□□□□□ -1.15
SNP1YIL061C YDL073WQ07454 984 aa7.89□□□□□ -1.15
SNP1YIL061C HEM1P09950 548 aaPredicted RBP7.88□□□□□ -1.15
SNP1YIL061C SSC1P0CS90 654 aaKnown RBP7.88□□□□□ -1.15
SNP1YIL061C BAS1P22035 811 aa7.88□□□□□ -1.15
SNP1YIL061C ARG1P22768 420 aa7.88□□□□□ -1.15
SNP1YIL061C YBR053CP38235 358 aa7.88□□□□□ -1.15
SNP1YIL061C MED8P38304 223 aa7.88□□□□□ -1.15
SNP1YIL061C YBP1P38315 674 aa7.88□□□□□ -1.15
SNP1YIL061C HSM3P38348 480 aa7.88□□□□□ -1.15
SNP1YIL061C EMW1P42842 904 aaKnown RBP7.88□□□□□ -1.15
SNP1YIL061C YJL107CP42947 387 aa7.88□□□□□ -1.15
SNP1YIL061C IML2P47031 731 aa7.88□□□□□ -1.15
SNP1YIL061C TAF6P53040 516 aa7.88□□□□□ -1.15
SNP1YIL061C YGR035CP53222 116 aa7.88□□□□□ -1.15
SNP1YIL061C YNL035CP53962 389 aaKnown RBP7.88□□□□□ -1.15
SNP1YIL061C SKY1Q03656 742 aa7.88□□□□□ -1.15
SNP1YIL061C MAG2Q06436 670 aaKnown RBP7.88□□□□□ -1.15
SNP1YIL061C YET3Q07451 203 aa7.88□□□□□ -1.15
SNP1YIL061C GPM2Q12008 311 aa7.88□□□□□ -1.15
SNP1YIL061C REC8Q12188 680 aa7.88□□□□□ -1.15
SNP1YIL061C MAM3Q12296 706 aa7.88□□□□□ -1.15
SNP1YIL061C RIB2Q12362 591 aaKnown RBP7.88□□□□□ -1.15
SNP1YIL061C TKL2P33315 681 aa7.87□□□□□ -1.15
SNP1YIL061C LIN1P38852 340 aaPredicted RBP7.87□□□□□ -1.15
SNP1YIL061C OAF1P39720 1047 aaPredicted RBP7.87□□□□□ -1.15
SNP1YIL061C PFK26P40433 827 aaKnown RBP7.87□□□□□ -1.15
SNP1YIL061C DUS1P53759 423 aaKnown RBP7.87□□□□□ -1.15
SNP1YIL061C VPS9P54787 451 aa7.87□□□□□ -1.15
SNP1YIL061C BET4Q00618 327 aa7.87□□□□□ -1.15
SNP1YIL061C BUD22Q04347 519 aaKnown RBP7.87□□□□□ -1.15
SNP1YIL061C SPC24Q04477 213 aa7.87□□□□□ -1.15
SNP1YIL061C AIM32Q04689 311 aa7.87□□□□□ -1.15
SNP1YIL061C NRT1Q08485 598 aa7.87□□□□□ -1.15
SNP1YIL061C YLR053CQ12026 108 aa7.87□□□□□ -1.15
SNP1YIL061C NBP2Q12163 236 aa7.87□□□□□ -1.15
SNP1YIL061C SLP1Q12232 587 aa7.87□□□□□ -1.15
SNP1YIL061C YDR524C-BQ3E6R4 66 aa7.87□□□□□ -1.15
SNP1YIL061C AI5_ALPHAQ9ZZX1 630 aa7.87□□□□□ -1.15
SNP1YIL061C HAP2P06774 265 aa7.86□□□□□ -1.15
SNP1YIL061C ERR1P0CX10 437 aa7.86□□□□□ -1.15
SNP1YIL061C ERR2P0CX11 437 aa7.86□□□□□ -1.15
SNP1YIL061C GPA2P10823 449 aa7.86□□□□□ -1.15
SNP1YIL061C POT1P27796 417 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
SNP1YIL061C PMI40P29952 429 aaKnown RBP7.86□□□□□ -1.15
SNP1YIL061C UIP5P36137 443 aa7.86□□□□□ -1.15
SNP1YIL061C YBR284WP38150 797 aa7.86□□□□□ -1.15
SNP1YIL061C ERR3P42222 437 aa7.86□□□□□ -1.15
SNP1YIL061C MNN11P46985 422 aaKnown RBP7.86□□□□□ -1.15
SNP1YIL061C TMA22P47089 198 aaPredicted RBP7.86□□□□□ -1.15
SNP1YIL061C BIO4P53630 237 aa7.86□□□□□ -1.15
SNP1YIL061C KTR6P54070 446 aa7.86□□□□□ -1.15
SNP1YIL061C ADI1Q03677 179 aa7.86□□□□□ -1.15
SNP1YIL061C AAD4Q07747 329 aa7.86□□□□□ -1.15
SNP1YIL061C ESC8Q08119 714 aa7.86□□□□□ -1.15
SNP1YIL061C DDC1Q08949 612 aa7.86□□□□□ -1.15
SNP1YIL061C YMR085WP0CF18 432 aa7.85□□□□□ -1.15
SNP1YIL061C PRP4P20053 465 aaKnown RBP7.85□□□□□ -1.15
SNP1YIL061C AMS1P22855 1083 aa7.85□□□□□ -1.15
SNP1YIL061C MCM5P29496 775 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms