RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W TAP42Q04372 366 aa2.49□□□□□ -2.01
TRA1YHR099W YOR389WQ08912 624 aa2.49□□□□□ -2.01
TRA1YHR099W FAP7Q12055 197 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W AVL9Q12500 764 aa2.49□□□□□ -2.01
TRA1YHR099W CBF1P17106 351 aa2.49□□□□□ -2.01
TRA1YHR099W ISC10P32645 267 aa2.49□□□□□ -2.01
TRA1YHR099W PUS6P53294 404 aa2.49□□□□□ -2.01
TRA1YHR099W RNH70P53331 553 aa2.49□□□□□ -2.01
TRA1YHR099W YMR210WQ03649 449 aa2.49□□□□□ -2.01
TRA1YHR099W ERV41Q04651 352 aa2.49□□□□□ -2.01
TRA1YHR099W RPL19AP0CX82 189 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W RPL19BP0CX83 189 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W STE12P13574 688 aa2.49□□□□□ -2.01
TRA1YHR099W ART10P18634 518 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W PTR2P32901 601 aa2.49□□□□□ -2.01
TRA1YHR099W MYO3P36006 1272 aa2.49□□□□□ -2.01
TRA1YHR099W SRP102P36057 244 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W YHL012WP38709 493 aa2.49□□□□□ -2.01
TRA1YHR099W HSE1P38753 452 aa2.49□□□□□ -2.01
TRA1YHR099W ORC6P38826 435 aa2.49□□□□□ -2.01
TRA1YHR099W HUL4P40985 892 aa2.49□□□□□ -2.01
TRA1YHR099W REF2P42073 533 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W IDS2P46958 469 aa2.49□□□□□ -2.01
TRA1YHR099W STR2P47164 639 aa2.49□□□□□ -2.01
TRA1YHR099W PAN2P53010 1115 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W HST1P53685 503 aa2.49□□□□□ -2.01
TRA1YHR099W PRM15Q03262 622 aa2.49□□□□□ -2.01
TRA1YHR099W TDA1Q03533 586 aa2.49□□□□□ -2.01
TRA1YHR099W MTC5Q03897 1148 aa2.49□□□□□ -2.01
TRA1YHR099W IWR1Q07532 353 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W FAR1P21268 830 aa2.49□□□□□ -2.01
TRA1YHR099W PHO90P39535 881 aa2.49□□□□□ -2.01
TRA1YHR099W MND1P53102 219 aa2.49□□□□□ -2.01
TRA1YHR099W TRP3P00937 484 aa2.49□□□□□ -2.01
TRA1YHR099W PMA1P05030 918 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W EXO70P19658 623 aa2.49□□□□□ -2.01
TRA1YHR099W MAG1P22134 296 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W MSH3P25336 1018 aa2.49□□□□□ -2.01
TRA1YHR099W YPT7P32939 208 aa2.49□□□□□ -2.01
TRA1YHR099W RPT1P33299 467 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W YPT52P36018 234 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W YBR063CP38083 404 aa2.49□□□□□ -2.01
TRA1YHR099W IME4P41833 600 aa2.49□□□□□ -2.01
TRA1YHR099W IDP2P41939 412 aa2.49□□□□□ -2.01
TRA1YHR099W TNA1P53322 534 aa2.49□□□□□ -2.01
TRA1YHR099W CWC25P53854 179 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W TAF11Q04226 346 aa2.49□□□□□ -2.01
TRA1YHR099W GAD1Q04792 585 aa2.49□□□□□ -2.01
TRA1YHR099W HRD1Q08109 551 aa2.49□□□□□ -2.01
TRA1YHR099W DDP1Q99321 188 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W TAL1P15019 335 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W ACB1P31787 87 aa2.48□□□□□ -2.01
TRA1YHR099W KRE6P32486 720 aa2.48□□□□□ -2.01
TRA1YHR099W PXL1P36166 706 aa2.48□□□□□ -2.01
TRA1YHR099W YDR089WP38966 869 aa2.48□□□□□ -2.01
TRA1YHR099W THO1P40040 218 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W MGS1P40151 587 aa2.48□□□□□ -2.01
TRA1YHR099W PEX17P40155 199 aa2.48□□□□□ -2.01
TRA1YHR099W ZIP2P53061 704 aa2.48□□□□□ -2.01
TRA1YHR099W COQ6P53318 479 aa2.48□□□□□ -2.01
TRA1YHR099W YNL260CP53846 198 aa2.48□□□□□ -2.01
TRA1YHR099W UGO1Q03327 502 aa2.48□□□□□ -2.01
TRA1YHR099W YLR126CQ12288 251 aa2.48□□□□□ -2.01
TRA1YHR099W ADH4P10127 382 aa2.48□□□□□ -2.01
TRA1YHR099W CTR86P25355 563 aa2.48□□□□□ -2.01
TRA1YHR099W URA1P28272 314 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W SPR1P32603 445 aa2.48□□□□□ -2.01
TRA1YHR099W SHE2P36068 246 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
TRA1YHR099W HSH155P49955 971 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W RMT2Q03305 412 aa2.48□□□□□ -2.01
TRA1YHR099W YMR209CQ03648 457 aa2.48□□□□□ -2.01
TRA1YHR099W MTR10Q99189 972 aa2.48□□□□□ -2.01
TRA1YHR099W SSK22P25390 1331 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W SSM4P40318 1319 aa2.48□□□□□ -2.01
TRA1YHR099W PRI2P20457 528 aa2.48□□□□□ -2.01
TRA1YHR099W YCL049CP25577 312 aa2.48□□□□□ -2.01
TRA1YHR099W STS1P38637 319 aa2.48□□□□□ -2.01
TRA1YHR099W CIC1P38779 376 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W GPD2P41911 440 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W GET1P53192 235 aa2.48□□□□□ -2.01
TRA1YHR099W MNT4P53745 580 aa2.48□□□□□ -2.01
TRA1YHR099W DIB1Q06819 143 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W STE6P12866 1290 aa2.48□□□□□ -2.01
TRA1YHR099W RAD4P14736 754 aa2.48□□□□□ -2.01
TRA1YHR099W POL3P15436 1097 aa2.48□□□□□ -2.01
TRA1YHR099W PFK2P16862 959 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
TRA1YHR099W RPN12P32496 274 aa2.48□□□□□ -2.01
TRA1YHR099W HIS7P33734 552 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W YKL069WP36088 180 aa2.48□□□□□ -2.01
TRA1YHR099W LAG1P38703 411 aa2.48□□□□□ -2.01
TRA1YHR099W SKN7P38889 622 aa2.48□□□□□ -2.01
TRA1YHR099W YHR218WP38899 603 aa2.48□□□□□ -2.01
TRA1YHR099W FTR1P40088 404 aa2.48□□□□□ -2.01
TRA1YHR099W FYV6P53913 173 aa2.48□□□□□ -2.01
TRA1YHR099W TFC6Q06339 672 aa2.48□□□□□ -2.01
TRA1YHR099W RGA2Q06407 1009 aa2.48□□□□□ -2.01
TRA1YHR099W LOT6Q07923 191 aa2.48□□□□□ -2.01
TRA1YHR099W YOR223WQ12015 292 aa2.48□□□□□ -2.01
TRA1YHR099W TSC13Q99190 310 aa2.48□□□□□ -2.01
TRA1YHR099W PRE7P23724 241 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms